Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00252 ATGGGCTTGCCACAGATACCCTCGACTGAAACTGCTGAAAACGTTGCAACCTTGCCATTTACTGCAGTTTTGCATAGCCCACCACAGTTTTCTGATGCAAGCTCATCTGAGATGAACAGCGTGCACAGTGCAAATGCTACTGGATTGGCTGCATATCCTCTGGGATCCTCTCTTGGTGATTTTCCAAAGAAGAATTCCCTAGAAGTTTCGAATGTTTCTGATAATACGTTTAATTGTACGGGAGCCTTGGAAGTTACTTCTAATGTCCACAGTCTGAAGATTGGTAATTCAGATGTAAGTGGTTGTTTCCATtcaaaaaatggacgaaatatTCATATCCCCGCTTCTAGGGTTGTGGGTTTTGAATCATACCAAGCAAGTTCTATAACTAATGGGTCCTCTGATACTCCTGCTGCTAATCTTAATTCCTCTGCTTATATTGATGGCGCATCTAATGATAACGAACCTGCCAATTCTTTGGCTAGGAAACGACTGCTGTCACCTCTGAGCAGTATGCTCTCCCCAAGCTACTTCAAGGGTGATCCTCTTGACATTGGCTGCAGAAATATTGGGATAGGCTCCCttgttaaaaatgataatttcacAAATTCAATTTCCCAAGATAATAAGAAGGCAAATGTTGGAAGTAGAAACGGTTACACCCTGCCTTCTTGGTCCTTTTCAAGCTGCTTGGAGACAAAAAGAACATTATGCAGTGTAGAATCCAGTTTTCTAACTGATGGGCCATTGCTGGAAAATAGAGGACTGGTATCCCATAACACTTCGTCCACTGCTGAAATTGATCACTTCAGAGAATTCAGTCATGTAAGATCCCACAGTGGTGCAGCATCCGTATCTCCTAGAAAGGTGAACTCACTCACACTTTCCTTCTCCCCTCTAGGTCCGAAGTTTTCTGAAAGGATGAAATCCCCTGGAGGATGTAGAATATTAAGGAGTTTGGAGCAACCGCTTGACAAATCCAACTCATGTCTGATGTCAATTCCTAAAGAAGATGTGTCAAGAATTGCGAGTACATCTTTTGAAGATGATATCTTTTGCAAAGACTTCTTTCCATCTTCTCTGGATGAAACTGCTGATATAAGTTGGCCGCCATCTCAAGAATTTGTTCCTGCCACTCAGTCCGCAAGGTTCACCAGAAGTTTGAGTGGGCTTCCTGTCAGGAGGTCCTTAGTTGGCTCATTTGAGGAGTCTCTTTTATCTGGTCGGTTCTTATCTGGAAACCATAGTAAGAGAATTGATGGTTTTCTTGCTGTCCTAAGTATTACGGGAGGGAAGTTTTCTCCTAAATCACAGAAGCTTCCTTTTTCAGTAAACAGTGTAGATGGAGATAGCTACCTACTGTATTATTCATCAATAGATCTAGCTGGAAATTCTTCATCAAACAAGTGCAGAGGCCAACAACAGAAACGAGGGCTTAGCAATGAGGATACACAAGTTTTCAAAAGTCGCTTACGTATCCCTATGAAAGGGCGCATACAGCTGGTGCTAAGCAATCCAGAAAAGACTCCTCTTCATACTTTCCTTTGCAACTACGATTTGAGTGACATGCCAGCTGGTACCAAAACATTCTTGCGCCAGAAACTCACCCTTGAATCCTCCAACCCAACTTCCCCTCTCTTGAAACAAGGGCTGGTGGCTTTGGACAATGAAAACATAGATAATGGGCTTCCAGCAGTACAAAAGAGCCATCCCATGTCATTTAGCAGAGAAGTAATGCACACAGATGCACTTGACACTATGAACGAAACTAAACCTATAAATCAGAGAAATGGAAAGTTCTCAAGCTTTGAGGATTTCTTAAACAAAGAGGATCTGCCCAAGCAATCTCAGAACAGGAAAACACCAGAGAGTCCATTCCTATTAAAGCTTGATGATGGCTGTATTGCTGATAATTGTGAGAGCAATGATATACAAGGACAGTGCTGTCATAAAGCATGTGATGAATCTAGGAAATCCTTGCATGCTTGTTCAAAAGTTAAGGACACTAATTGTGCTGGTCCACTTCGCTATGCTCTTCACCTCCGCTTCATATGTCCATTTCCTAAAAAGCCTACTAGATCAGCTCAAAGCTGCAGATCTAATTCTCTTACAGAAAAAACTGGATTGGACTTGTATGGTGAGCGCagattctatttatataatgaTTTGAGAGTCGTATTCCCTCAACGACATTCAGATTCTGATGAGGGCAAGTTGAACGTGGAATACCATTTTCCTGAAGATCCAAGATATTTCGACATCAACTG 2267 0.4133 MGLPQIPSTETAENVATLPFTAVLHSPPQFSDASSSEMNSVHSANATGLAAYPLGSSLGDFPKKNSLEVSNVSDNTFNCTGALEVTSNVHSLKIGNSDVSGCFHSKNGRNIHIPASRVVGFESYQASSITNGSSDTPAANLNSSAYIDGASNDNEPANSLARKRLLSPLSSMLSPSYFKGDPLDIGCRNIGIGSLVKNDNFTNSISQDNKKANVGSRNGYTLPSWSFSSCLETKRTLCSVESSFLTDGPLLENRGLVSHNTSSTAEIDHFREFSHVRSHSGAASVSPRKVNSLTLSFSPLGPKFSERMKSPGGCRILRSLEQPLDKSNSCLMSIPKEDVSRIASTSFEDDIFCKDFFPSSLDETADISWPPSQEFVPATQSARFTRSLSGLPVRRSLVGSFEESLLSGRFLSGNHSKRIDGFLAVLSITGGKFSPKSQKLPFSVNSVDGDSYLLYYSSIDLAGNSSSNKCRGQQQKRGLSNEDTQVFKSRLRIPMKGRIQLVLSNPEKTPLHTFLCNYDLSDMPAGTKTFLRQKLTLESSNPTSPLLKQGLVALDNENIDNGLPAVQKSHPMSFSREVMHTDALDTMNETKPINQRNGKFSSFEDFLNKEDLPKQSQNRKTPESPFLLKLDDGCIADNCESNDIQGQCCHKACDESRKSLHACSKVKDTNCAGPLRYALHLRFICPFPKKPTRSAQSCRSNSLTEKTGLDLYGERRFYLYNDLRVVFPQRHSDSDEGKLNVEYHFPEDPRYFDIN 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00252 755 Pfam Domain of unknown function (DUF4210) 397 444 IPR025261 -
Bva03g00252 755 PANTHER GH03947P 1 755 - -
Bva03g00252 755 Pfam Chromosome segregation during meiosis 675 754 IPR033473 -
Bva03g00252 755 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 1 755 - -
Bva03g00252 755 SMART DUF4210_2 397 456 IPR025261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00252 Bva-Chr3 1533311 1538839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00252 - - gmx:100819038 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00252 03 1533311 1538839 Bva03g00252 03 1533311 1538839 ECH
Bva03g00252 03 1533311 1538839 Bva04g01886 04 19291892 19297245 ECH