Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01876 ATGGGTAGCACATTCAATACACAGATTCTAGTGGACAAGCTGGGCAAGCTGAATAGTTCACAGACAAGCATTGAGACCTTGTCACATTGGTGTATTTTTCATATGAATAAAGCCAAACAAGTTGTTGAAACATGGGATAGGCAATTTCATTGTTCTCCGCGTGAGCAGAGGTTGGCATTTCTATACCTTGCAAATGATATATTGCAGAACAGCAGGCGGAAGGGTTCAGAATTTGTAGGAGAATTCTGGAAGGTCCTTCCAGATGCTATTCGAGATGTGATTGAAACTGGAGATGAGTTTGGAAGGAATGCCGCGTTCCGTCTGATTGGCATTTGGGAAGAGAGAAAAGTTTTTGGTTCTCGGGGTCAAATTCTTAAGGATGAGTTTATGGGGAGGCATGTGGAAAATAGTAACCGTAATGGGAAACCTGTGAACCTTAAACTGAAGCCTTCTGCTGGTAATGCATTGGAGAAAATAGTTTCGAGTTATAACATTGTTTATGGAGGGCAGACAGATGAAGATGTTATACTAAGCAAATGTAGGGATGCCATTAGCTGTGTTGAGAAAATAGACAAGGAAATTGGTCATGACAGTAATTCAGGGCAATTTCATGGATCTGCAATAGTGGATGAGCTCCAGGGACATAATGCTGTACTGAGGGACTGCATTGAGCAATTAACAGCAATAGAATCATCAAGAGCAAGCCTTGTGTCTCATCTGAGAGAGGCTCTCCAGGATCAGGAATTCAAGCTGGATCAAGTCCGTAACCAGATTCAGGCAGCACGTGTTCAATCAGAACAGGTAGGTAATACTTGCCGACAGTTACTGCAAGGCAACAACATCCAATCATTAACTGAGCAGAGctcaaaggaaactcaaaCCTCCATAACACCTCCAAGTTTTATTCCTGGAGATAGGGAACAATCAGCTCCATTAATGTACACACAGCAAGTATCTTTTGCTAAAAAATCTGGACACACTGAGGATGATCCCCGCAAGTCTGCAGCTGCTGCAGTGGCTGCTAAGCTAACTGCTTCAACATCCTCTGCACAGATGTTGTCTTATGTCCTGTCCTCCTTAGCATCAGAAGGGGTCATAGGTAATTCGATTAAAGAGTCTTCTGGTGATTGTCCTTCTGAGAAGAGGACTAAGCTGGAGAATGACCAGTCATCTTTTATACCATCTGAAAATCCTCAGCAACCACCACTTCCTCCCTTTCCGCTTCCTGAATCGCTTCAACACAATGTGTCGACCAGCAATCAGCAATCTACTCCCAATGATCCACCACCTCTGCCCTCATCGTCCCCTCCACCCTTGCCACCGCTGCCACCAGTGGCACAGTATCCAGGTTCACAGTTCATGCAAACTGCTGGCTCAGTTAGCAGTGTACCATATAGCTATAGCATGACACAACAGCAACAACTGTCAATGGCAGCCTATCCTGCTGTTGCAGCTTCCTTGAATAGTGTTTCCCCCTTTACTCCAGCTCCAGTGGGTAGTTACCAGGGTTTTCAGGTTTCTGATGGAAATTACTATAACCGACCCTCATCCATGCCAGCGGCTCCTATCTCACGTCAATA 1580 0.4437 MGSTFNTQILVDKLGKLNSSQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDAIRDVIETGDEFGRNAAFRLIGIWEERKVFGSRGQILKDEFMGRHVENSNRNGKPVNLKLKPSAGNALEKIVSSYNIVYGGQTDEDVILSKCRDAISCVEKIDKEIGHDSNSGQFHGSAIVDELQGHNAVLRDCIEQLTAIESSRASLVSHLREALQDQEFKLDQVRNQIQAARVQSEQVGNTCRQLLQGNNIQSLTEQSSKETQTSITPPSFIPGDREQSAPLMYTQQVSFAKKSGHTEDDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNSIKESSGDCPSEKRTKLENDQSSFIPSENPQQPPLPPFPLPESLQHNVSTSNQQSTPNDPPPLPSSSPPPLPPLPPVAQYPGSQFMQTAGSVSSVPYSYSMTQQQQLSMAAYPAVAASLNSVSPFTPAPVGSYQGFQVSDGNYYNRPSSMPAAPISRQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01876 526 MobiDBLite consensus disorder prediction 507 526 - -
Bva04g01876 526 SMART 558neu5 9 130 IPR006569 -
Bva04g01876 526 MobiDBLite consensus disorder prediction 284 307 - -
Bva04g01876 526 Coils Coil 237 264 - -
Bva04g01876 526 MobiDBLite consensus disorder prediction 284 302 - -
Bva04g01876 526 Pfam CID domain 9 120 IPR006569 -
Bva04g01876 526 Gene3D - 2 129 IPR008942 -
Bva04g01876 526 MobiDBLite consensus disorder prediction 368 453 - -
Bva04g01876 526 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 526 - -
Bva04g01876 526 PANTHER OS01G0925000 PROTEIN 1 526 - -
Bva04g01876 526 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Bva04g01876 526 SUPERFAMILY ENTH/VHS domain 9 117 IPR008942 -
Bva04g01876 526 CDD CID_RPRD_like 8 121 - -
Bva04g01876 526 MobiDBLite consensus disorder prediction 425 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01876 Bva-Chr4 19239012 19245393 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01876 K15559 - qsu:112023242 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01876 04 19239012 19245393 Bva04g01876 04 19239012 19245393 ECH
Bva03g00262 03 1586197 1594050 Bva04g01876 04 19239012 19245393 ECH