Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00262 ATGCTCGTGCTTGTCAAATGCTCATCTTTTACTTGTGTTGTGTATACAGGACTTGcAGTGTTTGATACAGCTGAAATCTTCTTCTGCTTACATACGAAAACAACAATCCctaatatcttttttcctttgctcCATGAGCCCAAGAACCAAGCACAGTACAATAATCGGCCATTGATTTTGCGCTTCTGTTCAACCACATTATTGGTTCCTGTTGTGCCAGCTCTTACTGGAAAGATGGGTAGCACATTCAATCCACAGATTCTAATGGAAAAGCTAGCCAAGCTGAATAGTTCACAGACGAGCATAGAAACTTTGTCACATTGGTGTATTTTTCATATGAACAAAGCAAAACAAGTTGTCGAAACATGGGATAGACAATTTCATTGTTCTCCTCATGAGCAGAGGTTGGCATTTCTATATCTTGCAAATGATATATTGCAGAACAGCAGGCGAAAGGGTTCAGAATTTGTAGGTGAATTCTGGAAGGTCCTTCCAGATGCCATTCGAGATGTGATTGAAAATGGAGATGAGTTTGGAAGGAATGCTGCCCTTCGTCTGATTGATATATGGGAAGAGAGAAAAGTTTTTGGTTCACGGGGTCAAATTCTTAAGGATGAGTTTGTAGGGAGGCACGTGGAAAATAGCAACCGTAATGGGAAACCTCTGAACCTTAAATTGAAGCCTTCTGCTGGGAATGCATTGGAGAAAATAGTTTCGAGTTATAATATTGTTTATGGAGGACAGACAGATGAAGATGTTCTACTAAGCAAATGCAGGAATGCCATTAGCTGTGTTGAGAAAGTAGATAAGGATATTGGTCAAGATAGTAATTCTGGGCAATTCCATGGATCTGCACTAGTGGATGAGCTCCAAGGACATAATGCTGTACTGAGGGACTGCATAGAGCAATTAACGGCAATAGAATCATCAAGAGCAAGCCTTGTGTCTCATCTGAGGGAGGCTCTCCAGGATCAGGAATTCAAGCTGGATCAAGTTCGTAACCAGATTCAGGCTGCACGTGTTCAGTCAGAGCTGGTAGGTAATACTTGCCAACAGTTACTAACCGGCAACAATATCCAATCATTAACTGAGCAGAGTTCAAGGGAAAATCAAACCTCCATAACACCTCCAGGCTTTATTCCTGGAGATAGGGAGCAATCAGCTCCATTAATGTACTCACAGCAAGTACCTTTTGCTCAAAAATCTGGACATATTGAGGAAGATCCACGCAAGTCTGCTGCTGCTGCAGTAGCTGCTAAGCTAACTGCTTCAACATCCTCAGCACAGATGCTGTCTTTTGTCTTATCCTCCTTAGCATCAGAAGGGGTCATAGGAAATTCAATTAAGGAGTCTTCTGGTGATTATCATCCAGAGAAAAGGACTAAGCTGGAGAATGACCAGCCATCTTACATACCATCAGAAAATCCCCAGCAACCACCTCTTCCTCCCTTTTCACATCCTGAATCGCTTCGACATAATGTGTCTACCACCAATCAGCAATCTACTCCCAATGACCCACCACCTCCACCTTCATCATCCCCTCCACCATTGCCACCATTGCCGCCAGTGGCACAGTATCCAGGGCCACAGTTCATGCAGACTGCTGGATCAATTAGCAGTGTACCATATAGCTATAGCATGACACAACAGCAACAACTGTCCATGGCAGCCTATCCTGCTGTTGCGGCTTCCTTGAATAGTGTTTCCCCTTTTACACCAGCTCCAATGGGTAGTTACCAAGGTTTTCAGGTTTCAGACGGAAATTACTACAACCAGCCTTCATCCATGCCTGCAGCTCCTATCTCGCGTCAATA 1814 0.4305 MLVLVKCSSFTCVVYTGLAVFDTAEIFFCLHTKTTIPNIFFPLLHEPKNQAQYNNRPLILRFCSTTLLVPVVPALTGKMGSTFNPQILMEKLAKLNSSQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSPHEQRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDAIRDVIENGDEFGRNAALRLIDIWEERKVFGSRGQILKDEFVGRHVENSNRNGKPLNLKLKPSAGNALEKIVSSYNIVYGGQTDEDVLLSKCRNAISCVEKVDKDIGQDSNSGQFHGSALVDELQGHNAVLRDCIEQLTAIESSRASLVSHLREALQDQEFKLDQVRNQIQAARVQSELVGNTCQQLLTGNNIQSLTEQSSRENQTSITPPGFIPGDREQSAPLMYSQQVPFAQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSFVLSSLASEGVIGNSIKESSGDYHPEKRTKLENDQPSYIPSENPQQPPLPPFSHPESLRHNVSTTNQQSTPNDPPPPPSSSPPPLPPLPPVAQYPGPQFMQTAGSISSVPYSYSMTQQQQLSMAAYPAVAASLNSVSPFTPAPMGSYQGFQVSDGNYYNQPSSMPAAPISRQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00262 604 MobiDBLite consensus disorder prediction 447 535 - -
Bva03g00262 604 Gene3D - 80 207 IPR008942 -
Bva03g00262 604 CDD CID_RPRD_like 85 199 - -
Bva03g00262 604 MobiDBLite consensus disorder prediction 502 526 - -
Bva03g00262 604 MobiDBLite consensus disorder prediction 585 604 - -
Bva03g00262 604 PANTHER OS01G0925000 PROTEIN 79 604 - -
Bva03g00262 604 ProSiteProfiles CID domain profile. 80 212 IPR006569 -
Bva03g00262 604 Pfam CID domain 87 198 IPR006569 -
Bva03g00262 604 MobiDBLite consensus disorder prediction 362 385 - -
Bva03g00262 604 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 79 604 - -
Bva03g00262 604 Coils Coil 315 342 - -
Bva03g00262 604 SUPERFAMILY ENTH/VHS domain 91 195 IPR008942 -
Bva03g00262 604 SMART 558neu5 87 208 IPR006569 -
Bva03g00262 604 MobiDBLite consensus disorder prediction 362 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00262 Bva-Chr3 1586197 1594050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00262 K15559 - gmx:100806108 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00262 03 1586197 1594050 Bva03g00262 03 1586197 1594050 ECH
Bva03g00262 03 1586197 1594050 Bva04g01876 04 19239012 19245393 ECH