Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01835 ATGGCTGCCTCATCTTCCATCTCcaactttctctcttttctcataCCCACAAAAGCTCCACCAGCATGCAAGATTCCAGCTTCACAATTGAATCTTCCTCCTTCATCCACTCGCTCTCAGACCCAGAAATTCGGTGACAATTTGGTGCCACTGGTTGCTCGAGATCACCATGGCTCTTCTGCTTCTGATTCATTATCTCCTGACTTGGCCTCAGTGATATGCCCCTCTCTCGCTTATGCCAACACTCTGTTCTTCAAATCTGCTTACAATGTCGAGGTGATTGTGGACGAAAACGAGCATGAGGAGAGGCTCCTCAACAGGTTCAGAAGGGAGGTCATGAGAGCTGGTGTTATCCAAGAATCCAAGAGGAGAAGGTACTTTGAGAACAAACAGGAGGAGAAGAAACGAAAGTCCCGCGAGGCTGCCAAGCGTAAAAGCAGAAGGCGCCCTCAGTTAAGGACTTCAACGCAGAACATGGAGGAACTCCCAAGAACCAAGAGGGAAGAGGACGAAGATAACTGGGATCTACCTGAAGACGTTCCATATTG 548 0.4708 MAASSSISNFLSFLIPTKAPPACKIPASQLNLPPSSTRSQTQKFGDNLVPLVARDHHGSSASDSLSPDLASVICPSLAYANTLFFKSAYNVEVIVDENEHEERLLNRFRREVMRAGVIQESKRRRYFENKQEEKKRKSREAAKRKSRRRPQLRTSTQNMEELPRTKREEDEDNWDLPEDVPY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01835 182 Gene3D Ribosomal protein S8 105 143 IPR038380 -
Bva04g01835 182 MobiDBLite consensus disorder prediction 127 182 - -
Bva04g01835 182 PRINTS Ribosomal protein S21 family signature 94 102 IPR001911 GO:0003735|GO:0005840|GO:0006412
Bva04g01835 182 PRINTS Ribosomal protein S21 family signature 114 124 IPR001911 GO:0003735|GO:0005840|GO:0006412
Bva04g01835 182 PRINTS Ribosomal protein S21 family signature 126 136 IPR001911 GO:0003735|GO:0005840|GO:0006412
Bva04g01835 182 PRINTS Ribosomal protein S21 family signature 102 111 IPR001911 GO:0003735|GO:0005840|GO:0006412
Bva04g01835 182 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 1 182 - -
Bva04g01835 182 Hamap 30S ribosomal protein S21 [rpsU]. 90 146 IPR001911 GO:0003735|GO:0005840|GO:0006412
Bva04g01835 182 Pfam Ribosomal protein S21 92 145 IPR001911 GO:0003735|GO:0005840|GO:0006412
Bva04g01835 182 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 182 IPR001911 GO:0003735|GO:0005840|GO:0006412
Bva04g01835 182 TIGRFAM S21p: ribosomal protein bS21 91 148 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01835 Bva-Chr4 19049988 19051058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01835 - - jre:109013640 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01835 04 19049988 19051058 Bva03g00303 03 1814108 1815440 BWGD
Bva04g01835 04 19049988 19051058 Bva04g01835 04 19049988 19051058 ECH