Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01119 ATGCCTGGTGGGGATCTGGAGCGCGGAGGGGGAACCAAGAATAGAGCAGACAACAGCAGCTACTCAGCTGTTGGTTCATCATACGTGGTTTATGATTCGGATACGCACTGGACATCATGGCTCGTTCCTATGTTTGTTGTCGCCAATATTGCGGTTTTCATTGTAGCTATGTACATCAACAATTGCCccaagaataataaatttgatttacaaGGAGATTGCGTGGCCAGGTTCCTTGGGAGATTCTCGTTCCAGCCCTTGCGGGAAAATCCTCTCTTTGGGCCTTCTTCTTCAACaTTAACAAAGATGGGAGCCCTGAAGTGGGAGTCAGTTGTGCAACACCATCAAGGATGGAGACTTATTACTTGCATTTGGTTACATGCTGGAGTTATTCATTTGGTTGCAAACATGTTGAGCCTGGTCTTCATCGGTATTCGCCTAGAACAACAGTTTGGGTTTGTGAGAATTGGTACCATTTACCTGTTGTCCGGATTCGGTGGCAGTgttttatcatctttatttATCAGAAACAGCATATCTGTTGGCGCATCTGGTGCATTGTTTGGACTTCTTGGAGCAATGCTTTCTGAACTCATCACAAACTGGACTATTTACACAAACAAGGCTGCAGCTTTGCTGACACTGCTGGTTATCATCGTGATCAATCTTGCTATTGGCATTCTTCCACACGTGGACAATTTTGCTCACATTGGGGGATTCTTGACTGGATTCCTCCTTGGATTTATTTTACTGCACCGTCCTCAGTTCGTATGGTTAGAGCAGCGGCATCTTCCTGCCGGTGCTCGTctcaaatcaaaatacaaGTCTTACCAGTATATTCTCTGGGTTGTTTCTCTTGCTCTGCTCGTTGTTTGGTTAACCATTGCATTGGTGATGCTATTCAAGGGTAAGAATGGCTATGATCACTGCCATTGGTGTCACTATCTAACCTGTGTTCCAACTTCAAGATGGAAATGCAGTGACAGTTA 989 0.4317 MPGGDLERGGGTKNRADNSSYSAVGSSYVVYDSDTHWTSWLVPMFVVANIAVFIVAMYINNCPKNNKFDLQGDCVARFLGRFSFQPLRENPLFGPSSSTLTKMGALKWESVVQHHQGWRLITCIWLHAGVIHLVANMLSLVFIGIRLEQQFGFVRIGTIYLLSGFGGSVLSSLFIRNSISVGASGALFGLLGAMLSELITNWTIYTNKAAALLTLLVIIVINLAIGILPHVDNFAHIGGFLTGFLLGFILLHRPQFVWLEQRHLPAGARLKSKYKSYQYILWVVSLALLVVWLTIALVMLFKGKNGYDHCHWCHYLTCVPTSRWKCSDS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01119 329 SUPERFAMILY Rhomboid-like 37 255 IPR035952 -
Bva04g01119 329 PANTHER RHOMBOID-RELATED 1 328 IPR002610 GO:0004252|GO:0006508|GO:0016021
Bva04g01119 329 Pfam Rhomboid family 112 254 IPR022764 GO:0004252|GO:0016021
Bva04g01119 329 PANTHER RHOMBOID-LIKE PROTEIN 3 1 328 - -
Bva04g01119 329 Gene3D - 36 255 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01119 Bva-Chr4 7538033 7541160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01119 - - gmx:100813345 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01440 03 13699559 13702373 Bva04g01119 04 7538033 7541160 ECH
Bva04g01119 04 7538033 7541160 Bva04g01119 04 7538033 7541160 ECH