Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01440 ATGCCTGTTGGAGATCTAGAGCGCGGTGGGGGAACCAAGAACAGAGCAGACAACAGCAGCTACTCAGCTGCAGCTTCCTCGTACGTCCATGATTCGGATACCCAATGGACATCATGGCTCGTTCCTATTTTTGTTGTCGCCAATATTGCGGTTTTCATTGTAGCTATGTACGTCAACAATTGCCCCAAGCACAATTTTGGTTTTCCAGGAGATTGCGTGGCCAAGTTCCTTGGGAGGTTCTCGTTCCAGCCCTTGCAGGAAAATCCTCTCTTTGGACCTTCTTCTTCAACATTAACGAAGATGGGAGCCCTTAAGTGGGATTCGGTTGTGCAACACCATCAAGGATGGAGACTTGTTACTTGCATTTGGTTACATGCTGGAGTTATTCATTTGGTTGCAAACATGTTGAGCCTGGTCTTCATTGGCATTCGCCTTGAACAacaatttgggttcgTGAAAATTGGTATCATTTACCTGATATCAGGATTTGGTGGCAGTGTCGTATCCTCTTTATTTATCAGAAACAACATCTCTGTTGGCGCTTCTGGTGCACTATTTGGACTTCTTGGAGCAATGCTTTCAGAACTCATCACAAACTGGactatttatacaaataaggCTGCAGCTTTGCTCACACTGCTGGTTATCATTGTTATCAATCTTGCTATTGGCATTCTTCCACACGTGGACAATTTTGCTCATATTGGGGGATTCTTGACTGGATTCCTCCTTGGATTTATTTTACTGCCCCGTCCTCAGTTTGGATGGTTAGAGCAGCGGCATGCTCCTCGTctcaaatcaaaatacaaGGCTTACCAATATGTTCTGTGGATTGTTTCTCTTGTTCTTCTGGTTGTTGGATTATCCATTGCTTTGGTGATGCTATTCCGGGGTGAGAATGGGTATGATCACTGCCATTGGTGTCACTATCTAACATGTGTTCCGACTTCAAAATGGAAATGCGATGACACTTA 974 0.4271 MPVGDLERGGGTKNRADNSSYSAAASSYVHDSDTQWTSWLVPIFVVANIAVFIVAMYVNNCPKHNFGFPGDCVAKFLGRFSFQPLQENPLFGPSSSTLTKMGALKWDSVVQHHQGWRLVTCIWLHAGVIHLVANMLSLVFIGIRLEQQFGFVKIGIIYLISGFGGSVVSSLFIRNNISVGASGALFGLLGAMLSELITNWTIYTNKAAALLTLLVIIVINLAIGILPHVDNFAHIGGFLTGFLLGFILLPRPQFGWLEQRHAPRLKSKYKAYQYVLWIVSLVLLVVGLSIALVMLFRGENGYDHCHWCHYLTCVPTSKWKCDDT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01440 324 Pfam Rhomboid family 110 252 IPR022764 GO:0004252|GO:0016021
Bva03g01440 324 Gene3D - 34 251 IPR035952 -
Bva03g01440 324 SUPERFAMILY Rhomboid-like 36 253 IPR035952 -
Bva03g01440 324 PANTHER RHOMBOID-RELATED 2 323 IPR002610 GO:0004252|GO:0006508|GO:0016021
Bva03g01440 324 PANTHER RHOMBOID-LIKE PROTEIN 3 2 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01440 Bva-Chr3 13699559 13702373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01440 - - gmx:100813345 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01440 03 13699559 13702373 Bva04g01119 04 7538033 7541160 ECH
Bva03g01440 03 13699559 13702373 Bva03g01440 03 13699559 13702373 ECH