Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01109 aTGTGTCAGCTAACATCTGATCTTCCCAGCAAATGCAATTCAAATCCCAATTACCTAATTTCAATGGAAGAGGCCGAGCAGCCATACATGCTCACCAACCCATTGATTCCCAGAGAAAAGATTCTAACAACACAAGCCCAGAAATCCAATCTCTGTCCTACTCTCAGAGAAGTCATTTCTTTATCCAAAATAGCCTTTCCCATGATTCTCACTGGCCTTTTGCTCTATTGCCGTTCAATGATCTCCATGCTCTTCCTCGGCCGCCTTGGCGAGTTCGCCTTAGCCGGAGGTTCACTCGCCGTCGGTTTTGCCAACATTACCGGGTACTCGATCCTCTCTGGTCTTGCAGTTGGAATGGAACCCATATGCGGCCAAGCCTTTGGTGCCAAAAAATTCACCTTGCTTGGTCTGTGCTTGCAGAGAACAgttcttttgcttctcttcACCTCTGTTCCTATATCTCTGCTTTGGATAAACATGAAGAAAATCCTCCTCTTGTGTGGCCAAGATGAAGCCATAGCCATTCATGCTCGATTATTTCTTGTCTACTCTATCCCTGACCTCTTTGCACAGTCCCTTTTACACCCATTACGAATTTACCTTCGAAGCCAATCGATTACCATGCCTCTCACAATTTGTGCCactttatcaatttttcttcacatACCCATCAATTATTTCCTTGTATCTTACCTTAATTTAGGAATTAAAGGTGTGGCTCTAAGTGGGGTTTGGACAAACTTCAACCTTGTAGCTTCTTTGATCCTCTACATCATTTTCTCAGGCACCCACAAGAAAACTTGGGGTGGTTTCTCATTTGAGTGCTTCACAGAGTGGAAATCTCTCCTCAATTTGGCCATTCCAAGCTGCATTTCTGTTTGTCTCGAATGGTGGTGGTACGAAATCATGATTCTGCTATGTGGGTTGCTTTTCAATCCAAGAGCAACGGTTGCATCCATGGGCATTTTGATCCAAACCACTTCTCTTCTCTACATTTTGCCATCTTCATTGAGCTTCAGTGTCTCAACAAGAGTTGGGAACAAACTTGGTGCTCAGAAGCCCTCAAAAGCTAAGCTTTCAGCCATTGTTGGACTTTCTTGCAGCTTCATATTGGGCCTCTCAGCTCTGTCATTCTCTGTTATGGTCAGGAACTTGTGGGCTTCCATGTTCACCATGGACAAAGAGATTATAAGCTTAACATCTCTGGTTTTGCCCATAATAGGGCTCTGTGAACTTGGAAATTGCCCACAAACCACAGGCTGTGGTGTGTTAAGAGGGACAGCAAGGCCAAAAGTTGGTGCAAACATCAACTTGGGATGCTTCTACCTTGTGGGAATGCCTGTGGCAATTTGGTTAGGTTTCTTTGCTGGGTTTGATTTTCAGGGTCTATGGTATGGCTTGCTGGCTGCTCAAGGGACATGTGCAGTGACCATGTTGGTGGTTCTGAGCCAAACAGATTGGGAACTTGAAGCTCAAAGAGCAAAGAAACTAACAGGAACAGGAGAAGTTCATGCAGATAAGCCAGCCAAATATGAAATCAAAGAAGGTTCTTTATCACATGCTGATTCTGATGAAGATAAACAGTTACCAGTTTA 1595 0.4326 MCQLTSDLPSKCNSNPNYLISMEEAEQPYMLTNPLIPREKILTTQAQKSNLCPTLREVISLSKIAFPMILTGLLLYCRSMISMLFLGRLGEFALAGGSLAVGFANITGYSILSGLAVGMEPICGQAFGAKKFTLLGLCLQRTVLLLLFTSVPISLLWINMKKILLLCGQDEAIAIHARLFLVYSIPDLFAQSLLHPLRIYLRSQSITMPLTICATLSIFLHIPINYFLVSYLNLGIKGVALSGVWTNFNLVASLILYIIFSGTHKKTWGGFSFECFTEWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLFNPRATVASMGILIQTTSLLYILPSSLSFSVSTRVGNKLGAQKPSKAKLSAIVGLSCSFILGLSALSFSVMVRNLWASMFTMDKEIISLTSLVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVAIWLGFFAGFDFQGLWYGLLAAQGTCAVTMLVVLSQTDWELEAQRAKKLTGTGEVHADKPAKYEIKEGSLSHADSDEDKQLPV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01109 531 PANTHER MULTIDRUG RESISTANCE PROTEIN 43 508 - -
Bva04g01109 531 CDD MATE_eukaryotic 57 493 IPR045069 GO:0042910|GO:1990961
Bva04g01109 531 Pfam MatE 288 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g01109 531 Pfam MatE 67 227 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g01109 531 TIGRFAM matE: MATE efflux family protein 67 464 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g01109 531 PANTHER PROTEIN DETOXIFICATION 43 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01109 Bva-Chr4 7436372 7437967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01109 K03327 - gmx:100777255 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01452 03 13796640 13798900 Bva04g01109 04 7436372 7437967 ECH
Bva04g01109 04 7436372 7437967 Bva04g01109 04 7436372 7437967 ECH