Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01452 ATGTGTCAGCTAACACCTGATCTTCCAAGCAAATGCAATTCAAATCCCAATTACCTAGTTTCAATCGAAGAGGGAAGAGAGCAGCAGCCAAACATGCTCACCAACCCATTGATCCCCAAGGAAAAGATTCTAACAAGACAAACCCAGAAACCCAATCTCTGTCCTGCTTTGAAAGAAGTCTTCTCTATATCCAAAATCGCTTTTCCTATGATTCTCACTGGCCTCTTGCTCTATTGTCGTTCAATGATCTCCATGCTCTTCCTCGGTCGCCTCGGGGAGCTCGCCTTAGCCGGTGGTTCATTAGCAGTTGGTTTTGCTAACATTACCGGCTACTCAATCCTCTCCGGTCTCGCTGTGGGAATGGAACCCATTTGTGGTCAAGCCTATGGTGCCAAAAAATTCACCTTGCTTGGTCTCTGCTTGCAGAGAACGGTTCTTCTGCTCGTTTTCACCTCTGTTCCCATATCTCTGCTTTGGAtaaacatgaagaaaattctCCTCTTGTGTGGCCAAGACGAAGCTATAGCCATTCAAGCCCGATTATATCTTGTCTATTCTATTCCTGACCTCTTAGCGCAGTCCCTTTTACACCCATTACGAATTTACCTTCGAAGCCAGTCCATTACCATGCCTCTCACCATTTGTGCCACTctgtcaatttttcttcacatACCCATTAATTACTTTCTTGTATCCTACCTTAATTTAGGAATTAAAGGTGTGGCTCTAAGTGGGGTATGGACTAACTTCAACCTCGTAGCTTCTTTGATCCTCTACATCATTTTTTCAGGCACCCACAAGAAAACATGGGGTGGTTTCTCAATTGAATGTTTAACTGAATGGAAATCCCTCCTCAATTTGGCCATTCCAAGCTGCATTTCTGTTTGTCTCGAATGGTGGTGGTACGAGATCATGATTCTGCTATGTGGGTTGCTTTTGAATCCCAGAGCAACGGTAGCATCCATGGGCATTTTGATCCAAACCACTTCTCTGCTCTACATTTTCCCATCATCATTAAGCTTCAGTGTCTCAACTAGAGTGGGGAACAAATTGGGTGCTCAAAAGCCTTCAAAAGCAAAGCTTTCAGCCATTGTGGGACTCTCTTGCAGCTTCATATTAGGCCTCTCAGCTCTCTTGTTCTCTGTTATGGTCAGAAATTTGTGGGCTTCCATGTTCACCATAGACAAAGAGATTATAAGCTTAACATCTCTGGTTTTGCCCATAATAGGGCTCTGTGAGCTTGGAAATTGCCCACAAACAACAGGGTGTGGGGTGCTAAGAGGCACAGCAAGGCCAAAAGTTGGTGCAAACATCAATTTGGGATGCTTCTACCTTGTGGGAATGCCTGTGGCGATTTGGTTAGGTTTCTTTGCTGGGTTTGATTTTCAGGGTCTATGGTATGGTTTGCTGGCAGCTCAAGGGGCATGTGCTGTGACCATGTTGGTGGTTCTGAGTCAAACGGATTGGGAATTTGAGGCTCAAAGAGCAAAGAAACTAACAGGAATAGGTGAAGGTCTTGATGATGACGACAATGACAGCCATGAGTTTGATGCAGAGAAGCCACCCAAAGCTGAAATCAAGGAAGATTCTTTATCATTTGCTGATTCTGATGAAGATGAACAGTCACcagttta 1634 0.4351 MCQLTPDLPSKCNSNPNYLVSIEEGREQQPNMLTNPLIPKEKILTRQTQKPNLCPALKEVFSISKIAFPMILTGLLLYCRSMISMLFLGRLGELALAGGSLAVGFANITGYSILSGLAVGMEPICGQAYGAKKFTLLGLCLQRTVLLLVFTSVPISLLWINMKKILLLCGQDEAIAIQARLYLVYSIPDLLAQSLLHPLRIYLRSQSITMPLTICATLSIFLHIPINYFLVSYLNLGIKGVALSGVWTNFNLVASLILYIIFSGTHKKTWGGFSIECLTEWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLLNPRATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQKPSKAKLSAIVGLSCSFILGLSALLFSVMVRNLWASMFTIDKEIISLTSLVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVAIWLGFFAGFDFQGLWYGLLAAQGACAVTMLVVLSQTDWEFEAQRAKKLTGIGEGLDDDDNDSHEFDAEKPPKAEIKEDSLSFADSDEDEQSPV 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01452 544 CDD MATE_eukaryotic 59 495 IPR045069 GO:0042910|GO:1990961
Bva03g01452 544 PANTHER MULTIDRUG RESISTANCE PROTEIN 46 513 - -
Bva03g01452 544 MobiDBLite consensus disorder prediction 502 544 - -
Bva03g01452 544 MobiDBLite consensus disorder prediction 515 531 - -
Bva03g01452 544 Pfam MatE 69 229 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01452 544 Pfam MatE 290 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01452 544 PANTHER PROTEIN DETOXIFICATION 46 513 - -
Bva03g01452 544 TIGRFAM matE: MATE efflux family protein 69 466 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01452 Bva-Chr3 13796640 13798900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01452 K03327 - gmx:100777255 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01452 03 13796640 13798900 Bva04g01109 04 7436372 7437967 ECH
Bva03g01452 03 13796640 13798900 Bva03g01452 03 13796640 13798900 ECH