Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00864 ATGACTACTGTGGCTCCTCCTCCATGGCTGTGCTTGTGCTTGTTACTGGTTGTAGTGGTTATCCAGTGTGTCGCAGGTGCAAGAGAGCTTCATGAGGTCGCGGTTCCAGAGACCGTCCATTTCGATACCGGCGGGCTGAGCAGGGAGAGCTTCCCAAAGGGATTCGTCTTTGGAACTGCAGCGTCTGCTTATCAAGTGGAAGGCATGGCCCACAAGGAAGGCCGTGGGCCCAGCATTTGGGACGTTTTCATCCGGAAACCTGATGGAACTGGCAAAGTAAATTGGAAAGGTGTTGAATACTACAATAGGTTGATCGATTACTTACTCGAAAGAGgCATTACTCCACATGCAAATCTGAACCATTATGATCTTCCTTTAGCTCTTGAGCTGAAATACAAAGGATGGCTGAGCCGCAGAGTAGTGAAAGATTTTGCTGATTATGCAGACTTTTGCTTCAAGACTTTCGGAGATAGGGTAAAGAATTGGATGACATTCAATGAACCTAGAGTAGTGGCTGCTCTTGGTTATGATACTGGATTCTTTGCTCCTGGAAGGTGTTCAAAAGCATTTGGAAATTGTTCAGCTGGCAATTCTGCTACTGAACCATACATTGTTGCACACAATCTGATATTATCTCATGAAGCTGCAGCTCAGAGATACCGTGAGAAGTACCAGGAAAAGCAAAAGGGAagaattggaatttttttggattttgtttggtATGAACCTCTTACAAGATCAAAGGCTGATAATTATGCAGCTCAAAGAGCCCGAGACTTTCATGTTGGATGGTTCATTCATCCCATTATATATGGCGAGTATCCAAGAACTATGCAAGATATTGTGGGGAAAAGGCTCCCTAAGTTCACTGAGGAAGAAGTTAAAATGGTGAAGGGCTCATCAGATTTTGTTGGTATCAACCAATACACCACTTACTATATATACGATCCCCATCGGTCAAAACCAAAAGACCTGGGTTACCAACAGGACTGGAATGCTGGATTTGCTTATGCAAAGAATGGAGTACCTATTGGTCCAAGGGCATATTCAGATTGGCTCTACAACGTCCCATGGGGCATGTACAAAGCATTGATGTACATCAAGGAGCGTTACAGGAACCCAACTGTGATTTTATCCGAAAATGGCATGGATGATCCAGGTAATGCAACACTTGCTCGGGCTCTGCATGACACAACAAGGATCAACTATTACAAAGGCTATATTACTCAACTAAAGAAGGCTATTGATGATGGAGCAAATGTGATTGGCTACTCCGCATGGTCATTGCTTGACAACTTTGAATGGAGGTTGGGCTACACATCAAGGTTCGGCATCATCTATGTCGATTTCCACACTCTCAAGAGAACCCCCAAGATGTCTGCATATTGGTTCAAGCAGTTACTTGCTAGAAAGAAGCAGTA 1421 0.4335 MTTVAPPPWLCLCLLLVVVVIQCVAGARELHEVAVPETVHFDTGGLSRESFPKGFVFGTAASAYQVEGMAHKEGRGPSIWDVFIRKPDGTGKVNWKGVEYYNRLIDYLLERGITPHANLNHYDLPLALELKYKGWLSRRVVKDFADYADFCFKTFGDRVKNWMTFNEPRVVAALGYDTGFFAPGRCSKAFGNCSAGNSATEPYIVAHNLILSHEAAAQRYREKYQEKQKGRIGIFLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHPIIYGEYPRTMQDIVGKRLPKFTEEEVKMVKGSSDFVGINQYTTYYIYDPHRSKPKDLGYQQDWNAGFAYAKNGVPIGPRAYSDWLYNVPWGMYKALMYIKERYRNPTVILSENGMDDPGNATLARALHDTTRINYYKGYITQLKKAIDDGANVIGYSAWSLLDNFEWRLGYTSRFGIIYVDFHTLKRTPKMSAYWFKQLLARKKQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00864 473 PANTHER BETA-GLUCOSIDASE 44 87 470 - -
Bva04g00864 473 PANTHER GLYCOSYL HYDROLASE 20 87 IPR001360 GO:0004553|GO:0005975
Bva04g00864 473 PRINTS Glycosyl hydrolase family 1 signature 300 314 IPR001360 GO:0004553|GO:0005975
Bva04g00864 473 PRINTS Glycosyl hydrolase family 1 signature 442 454 IPR001360 GO:0004553|GO:0005975
Bva04g00864 473 PRINTS Glycosyl hydrolase family 1 signature 376 384 IPR001360 GO:0004553|GO:0005975
Bva04g00864 473 PRINTS Glycosyl hydrolase family 1 signature 397 408 IPR001360 GO:0004553|GO:0005975
Bva04g00864 473 PRINTS Glycosyl hydrolase family 1 signature 418 435 IPR001360 GO:0004553|GO:0005975
Bva04g00864 473 Gene3D Glycosidases 88 473 - -
Bva04g00864 473 Gene3D Glycosidases 33 87 - -
Bva04g00864 473 PANTHER GLYCOSYL HYDROLASE 87 470 IPR001360 GO:0004553|GO:0005975
Bva04g00864 473 SUPERFAMILY (Trans)glycosidases 41 469 IPR017853 -
Bva04g00864 473 PANTHER BETA-GLUCOSIDASE 44 20 87 - -
Bva04g00864 473 Pfam Glycosyl hydrolase family 1 87 472 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00864 Bva-Chr4 5662067 5665138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00864 37 473 Glycoside Hydrolase AT3G18080 71.843 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00864 K05350 - cit:102611632 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00864 04 5662067 5665138 Bva03g00728 03 4355223 4358310 ECH
Bva04g00864 04 5662067 5665138 Bva04g00864 04 5662067 5665138 ECH