Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00728 ATGAAGATGAGGACTGTTACTGTAGCTCCTCCATGGCTGTGCTTATTGTTGTTTGTTGGGGTTATCCAGTGTGCTGCAGGTGCAAGAGAGCTCGATGAGGTCGCAGTTCCAGAGACCGTCCATTTCGATATGGTTGGCCTGAGCAGGGAGAGCTTCCCAAAGGGCTTCGTGTTCGGAACTGCCACGTCTGCTTATCAAGTGGAGGGCATGGCCGACATGGATGGCCGTGGGCCCAGCATTTGGGATGCTTTCGTCAGAAGACCTGATGGAACTGGCAAAGTAAATTGGAAAGGTGTTGCATACTACAACAGGTTGATCGATTACTTAATCGACAAAGGCATTATTCCGTACGCAACTCTGTGCCATTATGACCTTCCTCTAGCTCTTGAGCAGAAATACAAAGGATTGCTGAACCGAAGGATAGTGAAAGATTTTGCTGATTATGCAGACTTCTGCTTTAAGAACTTTGGAGACAGGGTGAAGAATTGGATGACATTCAATGAACCAAGAATAATAGCTACTTTTGGTTACGATGATGGAACCTTTGCTCCTGGAAGGTGTTCAAAAGCATATGGAAATTGTTCAGCTGGCAATTCAGCTACTGAACCATACATTGTTTcgcataatattatattatcacaTGCAGCTGCAGTTCACAGATACCGTGAGAAGTATCAgGGAAAGCAAAATGGGAAAATCGGAATCGTGGTGGATTTTATTTGGTATGAACCTCTTACAAGATCAAAGGCAGACAACTATGCAGCTGTTAGAGCCAGAGATTTTCATGTGGGATGGTTCCTCCATCCCATTATGTATGGAGCTTATCCAAAAACCATGCAAACTATTGTTCGGGAAAGGCTCCCTAAGTTCACTGAGAAAGAAGTTAAGTTAGTGAAGGGCTCAATAGATTTTGTAGGCATCAACCAATATACCACTGGCAATGCGTACAACGACCCCAATCGCCGAAAACCACAATATCCGAGTTACCTAACGGACTGGAATGTTGGATTTGCTTATGCAAAGAATGGAGAGCCTATTGGTCCAAGGGGACATTCATATACCCTCTACTATGTCCCCTGGGGTATGTATAAAGTATTGATGTACATGAAAGAGCATTATGGGAACCCAACAATGTTTGTAACAGAAAATGGCATGGATGATGCAGGTAATCTGACACTTGTTAGGGCTTTGCATGACACCGCAAGGATCAACTTTTACAAAAGCTATATCTCCAACCTAAAGATGGCAGTTGATGACGGAGCAAATGTTGGTGGCTACTTCGCATGGTCATTGCTTGATAACTTTGAGTGGATATTGGGTTACACATCAAGGTTTGGCATTGTCTATGTCGATCCTTGCACTCTCAGGAGACATCCCAAGATGTCTGCTCTCTGGTTCAAACAGCTACTTACCAGAAAGAAGTA 1424 0.4333 MKMRTVTVAPPWLCLLLFVGVIQCAAGARELDEVAVPETVHFDMVGLSRESFPKGFVFGTATSAYQVEGMADMDGRGPSIWDAFVRRPDGTGKVNWKGVAYYNRLIDYLIDKGIIPYATLCHYDLPLALEQKYKGLLNRRIVKDFADYADFCFKNFGDRVKNWMTFNEPRIIATFGYDDGTFAPGRCSKAYGNCSAGNSATEPYIVSHNIILSHAAAVHRYREKYQGKQNGKIGIVVDFIWYEPLTRSKADNYAAVRARDFHVGWFLHPIMYGAYPKTMQTIVRERLPKFTEKEVKLVKGSIDFVGINQYTTGNAYNDPNRRKPQYPSYLTDWNVGFAYAKNGEPIGPRGHSYTLYYVPWGMYKVLMYMKEHYGNPTMFVTENGMDDAGNLTLVRALHDTARINFYKSYISNLKMAVDDGANVGGYFAWSLLDNFEWILGYTSRFGIVYVDPCTLRRHPKMSALWFKQLLTRKK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00728 474 Gene3D Glycosidases 89 474 - -
Bva03g00728 474 PANTHER GLYCOSYL HYDROLASE 23 87 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 PANTHER GLYCOSYL HYDROLASE 88 471 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 PRINTS Glycosyl hydrolase family 1 signature 399 410 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 PRINTS Glycosyl hydrolase family 1 signature 420 437 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 PRINTS Glycosyl hydrolase family 1 signature 378 386 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 PRINTS Glycosyl hydrolase family 1 signature 301 315 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 PRINTS Glycosyl hydrolase family 1 signature 444 456 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 SUPERFAMILY (Trans)glycosidases 41 471 IPR017853 -
Bva03g00728 474 Pfam Glycosyl hydrolase family 1 88 473 IPR001360 GO:0004553|GO:0005975
Bva03g00728 474 PANTHER BETA-GLUCOSIDASE 44 23 87 - -
Bva03g00728 474 PANTHER BETA-GLUCOSIDASE 44 88 471 - -
Bva03g00728 474 Gene3D Glycosidases 40 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00728 Bva-Chr3 4355223 4358310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00728 46 472 Glycoside Hydrolase AT3G18080 67.585 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00728 K05350 - cit:102611632 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00864 04 5662067 5665138 Bva03g00728 03 4355223 4358310 ECH
Bva03g00728 03 4355223 4358310 Bva03g00728 03 4355223 4358310 ECH