Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00854 ATGGAGAGAGAAGAGCAGAAGGATTCTCTACGATCTTCCTTGATTCGAATCGCAGGGGAAGAaggattcaaagttgattcaGAGCAAAGAAGTGAGTCTTTTGAAGAAGTTAAAAAGCAGCTATGGTTATCAGGGCCGTTGATATCTGTAAATCTACTAAATTATTGTCTACAAGTTATATCTGTCATGTTTGTTGGGCATCTCGGAAAACTGCCTCTCTCTGGTGCTTCCATGGCTACTTCTTTTGCAACAGTCACTGGCTTTAGCTTACTGCAAGGAATGGCAAGTGCTTTGGATACTTTATGTGGGCAATCATATGGAGCAAAGCAGCACCAGATGCTAGGCACACACATGCAGAGAGCTATGCTTGTTCTTCTGATTGTCAGCATTCCCCTTGCAGTTATTTGGGCAAACACAAGGTCCATTCTAATGGCCTGTGGCCAAGATCCAGATATTGCCACAGAAGCTGGAAACTACGCTTGCTTCCTGATTCCATGCATTTTTGCCTATGCTCTTCTCCAGTGCTTGAACAGATTCCTACAATCCCAAAATATTGTATTCCCAATGATGTTTATCTCTGGATTTACAACTTTACTGCATATTCTTATCTGTTGGTTTATGGTATATAAATCTGGACTAGGCAACAGAGGAGCTGCCTTGGCAAATTGCATATCTTACTGGATTAATGTCATAGCATTGGCACTTTATGTcaatttttctccttcatgTGCAAAAACATGGAAAGGTTTTACCAGAGAGTCATTGAAGGACATCCCGGCTTTCCTGAGACTTGCCATCCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAATTGATGGTTCTCCTATCTGGTCTTCTTCCAAATCCAACACTAGAAACCTCAGTGCTTTCTGTCAgCCTCAATACTGCAGCAATTGTTTGGATGATCCCTTTCGGACTCAGTGGTGCTGTAAGTGTTCGAGTCTCGAATGAGCTAGGAGCTTCTCATCCACGGGCTGCACGGTTAGCAGTGCGAGTTGTCTTAGTAATGACCATTATTGAGGGCATCTTAGTTGGAACAGTTTTGATTCTAATACGCAATGTTTGGGGCTATGCTTATAGTAATGAGGTAGAAGTGGTCGGATATATAGCAATCATGTTGCCAATTCTTGCAGTGTCCAATTTCCTTGATGGAATTCAGTGTGTTCTCTCAGGCACAGCTAGAGGATGTGGTTGGCAGAAAATTGGTGCTTATGTCAATCTGGGATCTTACTATTTAGTCGGGATTCCATCAGCTGTCTTATTAGCTTTTGTCTTGCACGTTGGTGGCaagGGGCTTTGGCTGGGGATCATATGTGCATTGGTGGTTCAAGTGGCATCTCTACTTACCATTACAATACGTACTGATTGGGAGAAAGAGgCAAAGAAGGCTACAGAAAGAGTCTATGATTCAATGACATCCGAGGGCATAATATCATG 1466 0.4161 MEREEQKDSLRSSLIRIAGEEGFKVDSEQRSESFEEVKKQLWLSGPLISVNLLNYCLQVISVMFVGHLGKLPLSGASMATSFATVTGFSLLQGMASALDTLCGQSYGAKQHQMLGTHMQRAMLVLLIVSIPLAVIWANTRSILMACGQDPDIATEAGNYACFLIPCIFAYALLQCLNRFLQSQNIVFPMMFISGFTTLLHILICWFMVYKSGLGNRGAALANCISYWINVIALALYVNFSPSCAKTWKGFTRESLKDIPAFLRLAIPSAVMVCLEMWSFELMVLLSGLLPNPTLETSVLSVSLNTAAIVWMIPFGLSGAVSVRVSNELGASHPRAARLAVRVVLVMTIIEGILVGTVLILIRNVWGYAYSNEVEVVGYIAIMLPILAVSNFLDGIQCVLSGTARGCGWQKIGAYVNLGSYYLVGIPSAVLLAFVLHVGGKGLWLGIICALVVQVASLLTITIRTDWEKEAKKATERVYDSMTSEGIIS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00854 488 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g00854 488 Pfam MatE 46 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g00854 488 CDD MATE_eukaryotic 36 472 IPR045069 GO:0042910|GO:1990961
Bva04g00854 488 TIGRFAM matE: MATE efflux family protein 46 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g00854 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 25 476 - -
Bva04g00854 488 PANTHER PROTEIN DETOXIFICATION 25 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00854 Bva-Chr4 5611778 5614888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00854 K03327 - gmx:100792588 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00854 04 5611778 5614888 Bva03g00712 03 4260244 4262519 ECH
Bva04g00854 04 5611778 5614888 Bva04g00854 04 5611778 5614888 ECH