Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00829 ATGAAGAATAAAGAGCAAGAAAGCTCACATGTAGCCTCATATCTAAAGCTCTTCCATCTTCAACTTCAtctcttcaactttttctctctgtttctgGTGTTTGGCTGTGGTTTACTCATCGGAATCACCCTCAGTTTCTACCTCAAagatttttccttcaattttcaattccGAGAAATCCTTATTCCATCTTTTGGATTGAAACCATCTTTCCCAATCTCAAGGCCAAACCCAATTGCCAATATCTCAGAATCATCAAACCGGACGAAAGTTGTGTCATTGAATCAGACACAGGTGCAGATAACTCGAAATGGGTTGAAACAGTTTCTGAAACCTCCGAATGCTATGCATGACATGAACGAGGAAGAGTTGCTGTGGAGAGCTTCCATGGTTCCTCGGATTAAGGAAGTGCCATTCAGTGAGAGCCCAAAAgttgcatttttgtttttgacaaaaGGGTCTCTGCCGTTGGCTCCATTGTGGGAGAGATTCTTTAAGGGGCATAAAGGCTTTTATTCCATCTATGTCCATTCCCATCCGTCCTTCAATGAAACAGAACCAGAAAGTTCAGTTTTTTATGCTCGCAGGATACCAAGCAAGGTGGTAAGATGGGGAGAATTCAACATGATAGAGGCTGAAAGACGTCTCCTGGCCAATGCACTGCTTGACATCTCCAACAAACGATTCGTTCTGCTCTCAGAATCATGCATTCCTCTCTTCAATTTCTCCACCGTCTACAGTTATCTCATGAAGTCAACCAAAACCTTCGTGGAGGCCTACGATTTGGCCGGAGGCGTGGGACGTGGCCGGTACACCCCTAGAATGAGGCCGTTAGTGAAGCTGTCTCAGTGGAGAAAGGGCTCTCAATGGTTCCAAATAGACCGTGGACTGGCCACCGATATAGTCTCCGACCGGCGATATTTTCCGGTGTTCAAGAGGTACTGCCGGGCGCCGTGTTATGGGGATGAGCACTACTTGCCCACATTGGTTAGCATCAAGTTTTGGAAGAGGAACTCAAACAGAACCTTGACTTGGGTTGATTGGTCAAAGGGTGGAGCTCATCCAGCTAGGTATCAAAGAACTGATGTAACTCTGGATTTTTTGAAGAGGCTAAGGCATGGAAGCAAGTGTCTTTACAATGGGAAGATCACCAATGTTTGTCATTTATTTGCAAGGAAGTTCACACCTAAGGCTTTGGATAGATTGCTTAGGTTTGCTCCAAAGTTAATGCAactcaatta 1241 0.4239 MKNKEQESSHVASYLKLFHLQLHLFNFFSLFLVFGCGLLIGITLSFYLKDFSFNFQFREILIPSFGLKPSFPISRPNPIANISESSNRTKVVSLNQTQVQITRNGLKQFLKPPNAMHDMNEEELLWRASMVPRIKEVPFSESPKVAFLFLTKGSLPLAPLWERFFKGHKGFYSIYVHSHPSFNETEPESSVFYARRIPSKVVRWGEFNMIEAERRLLANALLDISNKRFVLLSESCIPLFNFSTVYSYLMKSTKTFVEAYDLAGGVGRGRYTPRMRPLVKLSQWRKGSQWFQIDRGLATDIVSDRRYFPVFKRYCRAPCYGDEHYLPTLVSIKFWKRNSNRTLTWVDWSKGGAHPARYQRTDVTLDFLKRLRHGSKCLYNGKITNVCHLFARKFTPKALDRLLRFAPKLMQLN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00829 413 PANTHER CORE-2/I-BRANCHING ENZYME 5 412 - -
Bva04g00829 413 Pfam Core-2/I-Branching enzyme 145 371 IPR003406 GO:0016020|GO:0016757
Bva04g00829 413 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 412 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00829 Bva-Chr4 5467045 5469924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00829 - - zju:107418796 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00829 04 5467045 5469924 Bva03g00670 03 4015357 4025673 ECH
Bva04g00829 04 5467045 5469924 Bva04g00829 04 5467045 5469924 ECH