Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00670 ATGAAGATTAAAAAGCAAGATCAACATTCACATACAGCCTCAAATCTGAAGCTCTTCAATGCCCATCGTCATCTCTTcaacttcttttcttgttttctggtGTTTGGCTCTGGTTTGCTCATTGGAATCACCCTCAGTTTCTACCTCAAAGattttttcctcaaatttgaaatcaaacaaatCCTTGTTCCATCTTTTGGATTGAAAACCTTTCCACCAAATGCCAATATTTCAGTATCGAATGATACAAAATTTCTGTCATTGAATCAGACAACATTGCAGGTGACCCGAAATGGGTTGACAGAGTTTTTGAAGCCTCCAAATGCTATGCATGATATGAATGAGCAAGAGTTGCTGTGGAGAGCTTCCATGGCTCCTCGGATTAAGGATGTTCCATTCAATTACACCCCAAAGgttgcatttttgtttttgacaaaaGGGCCTGTGCTGTTAGCTCCATTGTGGGAGAGATTCTTTAAGAGACACGAAGGCTTTTATTCTATCTATGTCCATTCTGATCCATCATTCAATCAAACAGAACCAGAAAGTTCAGTTTTTTATGACCGCAGGATTCCAAGCAAGGTGGTACGATGGGGAGAGTTTAACATGATAGAGGCTGAAAGACGTCTCCTAGCCAATGCACTGCTTGACATTGCCAATCAACGTTTTGTTCTTCTCTCTGAGTCATGTATTCctctgtttaatttctttaccatCTACAATTATCTAATGAACTCAAATCAAACCTTTGTGGAAGTCTTTGATTCGCCCGACGCCGTGGGCCTTGGCCGGTACAACCCCGGAATGAGTCCACTAGTTCATCTATCTCAGTGGAGAAAGGGCTCTCAGTGGTTCCAAATAGACCGTGAACTGGCCACTGAAGTAGTCTCCGACCGCCAATATTTTCCGGTGTTCAAGAGATATTGCAATGTGTCTTGCTGTGGGGAAGAACATTACATGCCCACATTGCTTAGTATCAAATATTGGAGGAACAACTCAAACAGAAGCTTGACTTGGGTTGATTGGTCAAAGGGTGGAATTCATCCATCAAAGTATATCAGAAGTGATGTAACTGTGGATTTTTTGGAATGGCTAAGGCATGGCAGCAAGTGTGAGTACAATGGGAAGACCACTaatgtttgttatttatttgcaaGAAAATTCACACCACATGCCTTGAATAGACTCCTTAGGTTCTTCATAAGAATGAAGATTAAAGAGCAAGAACATTCACATGCAGTCTCATATCTGAAGCTCTTCATTTCCCAACTTCATATATTCaacttcttttctcattttctggTGTTTGGCTCTGGTTTACTCTTTGGAATCACCCTCAGTTTCTACCTTAAAGGTTTTTCCctcaaatttgaaatcaaacaaatCCTTGTTCCATCTTTTGGATTGAAAACCTCACTACCAAATCCAATCTCAAATGCCAATATTTCAGTATCGAATGATACGAAATTTCTGTCATTGAATCAGACAACATTGCAGGTGACCCGAAATGGGTTGACGGAATTTTTGAAGCCTCCAAATGCTATGCGTGATATGAATGAGCAAGAGTTGCTGTGGAGAGCTTCCATGGTTCCTCGTATTAAGGATGTCCCCTTCAATTACACCCCAAAGGTTgcgtttttgtttttgacaaaaGGGCCTGTGCTGTTGGCTCTGTTGTGGGAGAGATTCTTTAAGGGACATAAAGGATTTTATTCTATCTATGTTCATTCTGATCCATCATTCAATCAAACAGAGCCAGAAAGTTCAGTTTTTTATGATCGCAGGATTCCAAGCAAGGTGGTACGATGGGGAGAGTTCAACATGATAGAGGCTGAAAGACGTCTCCTAGCCAATGCACTGCTTGACATCTCCAATCAACGTTTTGTTCTGCTCTCAGAGTCATGTATTCCTCTGTTTAATTTCTCTACCATCTACAACTATCTAATGAACTCAAATGAAACCTTTGTGGAAGCCTTTGATTTTCCCGGCGCCGTGGGACGTGGCAGGTACAACCCTAGAATGAGGCCATATGTTCATTTATCTCAGTGGAGGAAAGGCTCTCAATGGTTCCAAATAGACCGTGAACTAGCTACTGAAATAGTCTCCGACCACCGCTATTTTCCGGTGTTGAAGAGGTATTGCAGGCATTCGTGCTGCGGTGAAGAACACTACATGCCCACATTGGTAACCCGAAATGGGTTGAAAGAGTTTTTGAAGCCTCCAAATGCTATGCATGATATGAATGAGGAAGAGTTGCTGTGGAGAGCTTCCATGGTTCCTCGGATTAAGGACGTTCCATTCAATTACACCCCAAAGgttgcatttttgtttttgacaaaaGGGCCTGTGCTGTTAGCTCCATTGTGGGAGAGATTCTTTAAGGGTCATAAAGGCTTTTATTCCATTTATGTCCATTCTCATCCATCCTTCAACCAAACAGAACCAGAAAGTTCAGTTTTTCACAACCGCAGGATTCCAAGCAAGGTGGTACAATGGGGAGAGTTTAACATGATAGAGGCTGAAAGACGTCTCGTAGCCAATGCACTGCTTGACATTGCCAATCAACGTTTTGTTCTTCTCTCTGAGTCATGTATtcctttgtttaatttctctaCCATCTACAATTATCTAATGAACTCAAACAAAACCTTTGTGGAAGCCTATGATTTGCCCGGTGCGGTGGGACGTGGCCGGTACATCCCTAGAATGAGGCCACTAGTTTATCTATCTCAGTGGAGAAAGAGCTCCCAATGGTTCCAAATAGACCGTGAACTGGCCACCGAAATAGTCTCCGACCGCTG 2801 0.3966 MKIKKQDQHSHTASNLKLFNAHRHLFNFFSCFLVFGSGLLIGITLSFYLKDFFLKFEIKQILVPSFGLKTFPPNANISVSNDTKFLSLNQTTLQVTRNGLTEFLKPPNAMHDMNEQELLWRASMAPRIKDVPFNYTPKVAFLFLTKGPVLLAPLWERFFKRHEGFYSIYVHSDPSFNQTEPESSVFYDRRIPSKVVRWGEFNMIEAERRLLANALLDIANQRFVLLSESCIPLFNFFTIYNYLMNSNQTFVEVFDSPDAVGLGRYNPGMSPLVHLSQWRKGSQWFQIDRELATEVVSDRQYFPVFKRYCNVSCCGEEHYMPTLLSIKYWRNNSNRSLTWVDWSKGGIHPSKYIRSDVTVDFLEWLRHGSKCEYNGKTTNVCYLFARKFTPHALNRLLRFFIRMKIKEQEHSHAVSYLKLFISQLHIFNFFSHFLVFGSGLLFGITLSFYLKGFSLKFEIKQILVPSFGLKTSLPNPISNANISVSNDTKFLSLNQTTLQVTRNGLTEFLKPPNAMRDMNEQELLWRASMVPRIKDVPFNYTPKVAFLFLTKGPVLLALLWERFFKGHKGFYSIYVHSDPSFNQTEPESSVFYDRRIPSKVVRWGEFNMIEAERRLLANALLDISNQRFVLLSESCIPLFNFSTIYNYLMNSNETFVEAFDFPGAVGRGRYNPRMRPYVHLSQWRKGSQWFQIDRELATEIVSDHRYFPVLKRYCRHSCCGEEHYMPTLVTRNGLKEFLKPPNAMHDMNEEELLWRASMVPRIKDVPFNYTPKVAFLFLTKGPVLLAPLWERFFKGHKGFYSIYVHSHPSFNQTEPESSVFHNRRIPSKVVQWGEFNMIEAERRLVANALLDIANQRFVLLSESCIPLFNFSTIYNYLMNSNKTFVEAYDLPGAVGRGRYIPRMRPLVYLSQWRKSSQWFQIDRELATEIVSDR 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00670 933 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 732 933 IPR044174 GO:0016757
Bva03g00670 933 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 407 730 IPR044174 GO:0016757
Bva03g00670 933 Pfam Core-2/I-Branching enzyme 773 933 IPR003406 GO:0016020|GO:0016757
Bva03g00670 933 Pfam Core-2/I-Branching enzyme 139 366 IPR003406 GO:0016020|GO:0016757
Bva03g00670 933 Pfam Core-2/I-Branching enzyme 544 732 IPR003406 GO:0016020|GO:0016757
Bva03g00670 933 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 402 IPR044174 GO:0016757
Bva03g00670 933 PANTHER CORE-2/I-BRANCHING ENZYME 732 933 - -
Bva03g00670 933 PANTHER CORE-2/I-BRANCHING ENZYME 5 402 - -
Bva03g00670 933 PANTHER CORE-2/I-BRANCHING ENZYME 407 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00670 Bva-Chr3 4015357 4025673 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00670 - - jre:108998451 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00670 03 4015357 4025673 Bva03g00672 03 4034808 4038290 BWGD
Bva04g00829 04 5467045 5469924 Bva03g00670 03 4015357 4025673 ECH
Bva03g00670 03 4015357 4025673 Bva03g00670 03 4015357 4025673 ECH