Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00795 ATGGGCCTGAAAAACACAGCCTTATTTTTCCTTGCCATACTCCTTCCTTTGCAtatttctccttcttcttcgtcTAGCGTATTTTCTTCAGAGACTTCTGGATTCGCCACCTCCGTTCTCGACGTTTCAGCTTCGCTTGAGCAAACCCGCCAAGTGCTATTCTTCACCCCCAAAAGGTTTCCACCTTCACCCCAGCAAGAGCAAGAACAAACTCGGACTGCACCcacttcttcatcttccttcTCTGTTCGATTACACCCAAGAGACGCGGTGTTCAATCCACATCACCGGAGCTACAAGAGCTTGGTCCTGGCCCGACTCGACCATGACACAGCCCGTGTCAAATCGCTCGTCACCAAGCTGCAGGTCGCCCTCAGCCACAACAACATGTCGGATCTCCGGCCAACTGAAACGGAGCTCCAACCTGAAGCCCTCTCCACCCCAGTTTCATCCGGTACCGGCCAAGGGAGTGGCGGGTATTTAGCCAGAGTCGGTATCGGCCAACCACCGCAGCAGTTCTACATGCTTCTGGATACGGGAAGCGACGTGAACTGGCTTCAAAGCAAGCCTTGTGTGGATTGTTACCAGCAGTCCGACCCAATTTTTGACCCGTCCGAGTCATCCTCTTATTCCCTGGTCACCTGCGATTCTCAAGAGTGCTCGGCTCTGGACACATCTGCTTGTCTATATGACAAGTGTCTTTACCAAGTATCGTACGGGGACGGTTCCTTCACGGTTGGCGAATACATCACCGAAACGCTGACGTTTGATAACTCTAGTTCCTTGTATGGTGTCGCGATGGGTTGCGGTCACGTTAACGAGGGTCTATTTGCAGGAGCTGCGGGATTACTCGGTCTCGGCGGTGGGTCTCCTTCACTGACATCACAAATCAAAGCGTCGTCGTTTTCCTACTGCTTGGTTGATCGTGACTCGAACAAATCGTCAACTCTGGACTTTAACTACTCGGCTCTTCCCGGTCACTCAGTCACCGTCCCGTTACTAAGAAACCCAAAGATGAACACGTTTTACTACGTTAATCTCACCGGAATTAGCGTCGGGGGGCGCATGCTTCCTCTCCCGGCGTCAACATTCGCGTTGAACGATTCAGGAAGAGGTGGAGTGATTGTCGACTCGGGAACCACCATAACTCGGTTGCGACGGTTGGCCTACTACTTGCTCCGTGACGAGTTCAGGATTCAGACTGTGAACTTACGACCTTCCACGACCGGCGACACCTTCTTTGATACATGCTATGATTTCTCGTCGTTGACGTCTGTGACGGTGCCAACGTTATCGTTTCACTTTAGCGGCGGGAAGTCGCTGAGATTGCCTGCGAAGAACTACCTGATTCCCGTGGAATCCAACGGAACTTTCTGCTTCGCTTTTGCTCCGTCTTCGTCGTCGTCTTTATCCATCATAGGGAATGTGCAACAACAGGGAACACGTGTCAGCTTTGATATAGCCAATTCTATAGTGGGATTCTCTCCCGATAATTGTTA 1499 0.5023 MGLKNTALFFLAILLPLHISPSSSSSVFSSETSGFATSVLDVSASLEQTRQVLFFTPKRFPPSPQQEQEQTRTAPTSSSSFSVRLHPRDAVFNPHHRSYKSLVLARLDHDTARVKSLVTKLQVALSHNNMSDLRPTETELQPEALSTPVSSGTGQGSGGYLARVGIGQPPQQFYMLLDTGSDVNWLQSKPCVDCYQQSDPIFDPSESSSYSLVTCDSQECSALDTSACLYDKCLYQVSYGDGSFTVGEYITETLTFDNSSSLYGVAMGCGHVNEGLFAGAAGLLGLGGGSPSLTSQIKASSFSYCLVDRDSNKSSTLDFNYSALPGHSVTVPLLRNPKMNTFYYVNLTGISVGGRMLPLPASTFALNDSGRGGVIVDSGTTITRLRRLAYYLLRDEFRIQTVNLRPSTTGDTFFDTCYDFSSLTSVTVPTLSFHFSGGKSLRLPAKNYLIPVESNGTFCFAFAPSSSSSLSIIGNVQQQGTRVSFDIANSIVGFSPDNC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00795 499 Pfam Xylanase inhibitor C-terminal 343 495 IPR032799 -
Bva04g00795 499 ProSiteProfiles Peptidase family A1 domain profile. 160 495 IPR033121 -
Bva04g00795 499 PANTHER ASPARTYL PROTEASES 25 499 IPR001461 GO:0004190|GO:0006508
Bva04g00795 499 Gene3D Acid Proteases 134 319 IPR021109 -
Bva04g00795 499 MobiDBLite consensus disorder prediction 61 81 - -
Bva04g00795 499 Gene3D Acid Proteases 321 499 IPR021109 -
Bva04g00795 499 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 175 186 IPR001969 GO:0004190|GO:0006508
Bva04g00795 499 PRINTS Pepsin (A1) aspartic protease family signature 166 186 IPR001461 GO:0004190|GO:0006508
Bva04g00795 499 PRINTS Pepsin (A1) aspartic protease family signature 374 385 IPR001461 GO:0004190|GO:0006508
Bva04g00795 499 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 25 499 - -
Bva04g00795 499 MobiDBLite consensus disorder prediction 56 81 - -
Bva04g00795 499 Pfam Xylanase inhibitor N-terminal 160 319 IPR032861 -
Bva04g00795 499 SUPERFAMILY Acid proteases 155 499 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00795 Bva-Chr4 5192998 5194905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00795 137 499 Miscellaneous Gene Families AT1G77480 25.871 1.41e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00795 K22683 - gmx:100784849 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00795 04 5192998 5194905 Bva03g00630 03 3739321 3741230 ECH
Bva04g00795 04 5192998 5194905 Bva04g00795 04 5192998 5194905 ECH