Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00630 ATGGCTCTAAACAGAgcattgtttttctttgccaCACTACTTCTCTcgcttctttctccttcttcgtCTCGCATGTTTTCTTCAGAGACTTCTGAATTCGCCACGTCTGTTTTGGACGTTTCAGCTTCGTTGCAGCAAACCCAAACAATCCTCTCCTTCAACCCCGAAACGTTTCAGCCTTCTCAAACACAAGAGCAAGAAGAAACGCTAACCACGCCcacttcttcttcatcttcattctCTGTTCAGTTACATCCAAGAGAAACCCTGCTCAATGCACAGAACCAGAACTATAAGAGCTTGGTCCTGGCCCGGCTCGATCGTGACTCAGCCCGAGTCAAATCGCTCAACACCAAGCTGCAGGTGGCCCTCAACCACGTCAACAGGTCGGATCTCCGGCCAACTGAAACGGAGCTCCAACCCGAAGAACTTTCTACGCCGGTGTCCTCCGGAATCGGCCAAGGAAGTGGCGAGTACTTCACCAGAGTCGGTGTCGGGCAACCAGCGAAGCCGTTCTACATGGTTCTCGACACGGGAAGCGACGTGAACTGGCTTCAATGCAAGCCTTGTACGGATTGTTACCAGCAAACCGACCCGGTTTTTGATCCGTCTGCGTCATCTTCGTACAGCCCGGTTACCTGCGATTCTCAACAGTGCTCGTCTCTGGACGCGTCCTCTTGTCGTAACGACAAGTGTCTTTACCAGGTATCGTACGGTGACGGTTCCTTCACGGTTGGCGAATACATCACCGAAACGCTGTCGTTTGGTAACACCGGGTCCATAAGCCGTGTGCCGATGGGTTGTGGTCACGATAACGAAGGTCTATTTGTGGGAGCTGCTGGGTTACTTGGGCTCGGCGGTGGGTCACTCTCACTGACATCACAGATCAAAGCATCGTCATTTTCCTACTGCTTGGTTGATCGTGACTCGGGCAAATCGTCAACTCTTGAGTTTAACACGGCTCGACCCGGTGACTCAGTCACTGCCCCGTTACTGAAGAACCCGAAGCTGAACACGTTTTACTACGTTAAACTCACCGGAATGAGCGTCGGGGGCCAAATGGTTCCCCTCCAACCATCAACATTCGCGTTGGACAGTTCCGGTAGAGGAGGAATCATTGTTGACTCGGGAACCGCGATAACTCGGTTGCAAACTCAGTCCTACAACTCGCTCAGGGACGCGTTCAAGAGACTGACTCAGAACTTACGCTCCACAACCGGCTTCGCTTTGTTTGATACATGCTATGACTTTTCGTCGCTGAAGTCTGTAACGGTGCCAACGGTGTCGTTTCACTTTAGCGACGGGAAGTCGCTGAGGTTGCCGGCGAAGAACTACCTGATTCCGGTGGATTCCACCGGAACCTTCTGCTTCGCTTTTGCTCCGTCGTCGTCGTCTTTATCAATCATAGGCAATGTGCAGCAACAGGGGACACGTGTCAGCTTTGATCTAGCCAACTCTTTAGTGGGATTCTCACCCACTAAGTGtta 1487 0.4997 MALNRALFFFATLLLSLLSPSSSRMFSSETSEFATSVLDVSASLQQTQTILSFNPETFQPSQTQEQEETLTTPTSSSSSFSVQLHPRETLLNAQNQNYKSLVLARLDRDSARVKSLNTKLQVALNHVNRSDLRPTETELQPEELSTPVSSGIGQGSGEYFTRVGVGQPAKPFYMVLDTGSDVNWLQCKPCTDCYQQTDPVFDPSASSSYSPVTCDSQQCSSLDASSCRNDKCLYQVSYGDGSFTVGEYITETLSFGNTGSISRVPMGCGHDNEGLFVGAAGLLGLGGGSLSLTSQIKASSFSYCLVDRDSGKSSTLEFNTARPGDSVTAPLLKNPKLNTFYYVKLTGMSVGGQMVPLQPSTFALDSSGRGGIIVDSGTAITRLQTQSYNSLRDAFKRLTQNLRSTTGFALFDTCYDFSSLKSVTVPTVSFHFSDGKSLRLPAKNYLIPVDSTGTFCFAFAPSSSSLSIIGNVQQQGTRVSFDLANSLVGFSPTKC 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00630 495 Pfam Xylanase inhibitor N-terminal 159 318 IPR032861 -
Bva03g00630 495 Gene3D Acid Proteases 319 495 IPR021109 -
Bva03g00630 495 ProSiteProfiles Peptidase family A1 domain profile. 159 491 IPR033121 -
Bva03g00630 495 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 13 495 - -
Bva03g00630 495 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 372 383 IPR001969 GO:0004190|GO:0006508
Bva03g00630 495 Pfam Xylanase inhibitor C-terminal 341 491 IPR032799 -
Bva03g00630 495 PANTHER ASPARTYL PROTEASES 13 495 IPR001461 GO:0004190|GO:0006508
Bva03g00630 495 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 174 185 IPR001969 GO:0004190|GO:0006508
Bva03g00630 495 SUPERFAMILY Acid proteases 153 495 IPR021109 -
Bva03g00630 495 MobiDBLite consensus disorder prediction 57 83 - -
Bva03g00630 495 Gene3D Acid Proteases 133 318 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00630 Bva-Chr3 3739321 3741230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00630 136 495 Miscellaneous Gene Families AT1G77480 25.250 7.14e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00630 K22683 - gmx:100784849 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00795 04 5192998 5194905 Bva03g00630 03 3739321 3741230 ECH
Bva03g00630 03 3739321 3741230 Bva03g00630 03 3739321 3741230 ECH