Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00173 ATGGCCGCTAGTCGAAAGCTTCAGGGAGAGATTGATCGTGTTCTGAAGAAGGTCCAGGAAGGCCTTGAAGTCTTCGATAGTATATGGAACAagGTTTACGATACCGAAAATGCAAAtcagaaagagaaatttgagGCCGACTTGAAGAAGGAGATTAAGAAGCTCCAGAGGTATCGAGACCAGATTAAGACTTGGATTCAGTCTAGCGAGATCAAGGACAAGAAGGTTAGTGCCTCTTACGAACAGGCCCTGGTGGATGCTCGCAAGCTCATTGAACGTGAAATGGAAAGATTTAAGATCTGTGAAAAGGAGACTAAAACCAAAGCATTTTCCAAAGAAGGCTTGGTCCAACAGCCTAAAACTGACCCAAAGGAGAAGGCAAAATCAGAGACCAGGGACTGGTTGAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAGCTTTGAAGCTGAGCTTGAAGGGCTATCTGTCAAGAAAGGAAAGACGAGGCCACCCAGATTGACACATCTAGAGACATCAATTACTCGACATAAGGCTCATATAAAGAAATGTGAATGGATCCTGAGGCTACTGGATAATGATGAATTGAGTCCTGAACAGGTTAATGATGTCAAAGATTTCTTGGATGATTACATGGAGCGAAATCAGgaggactttgatgattttagtgATGTTGATGAGCTTTACAGTTCATTACCTTTAGACAAGGTGGAGTCTCTTGAAGATCTCGTTACAATTGGTCCACCTGGCGTTGTTAAGGGACCTGCTGTTAGTGTGAAAACGACTTCAGCAGCATCAGCATCAGCATCACAAACTTCTGCAACCATGACTTCTAATGCTCATCAGGGTGCTTTTGTTCAGGAGCAAGCTGATGATACAGCTTCCCAGGATAGCAATTCTGATATTGTTGCGAGAACTCCACCTTTGAAGAGTAGTGGAATTAGTTCTGCTGCTTCAACACCTGTTGTTAACCATTCCCCTTCTGTCCCTCCGAATATTTTGGTTCATAGTCCATCAGGTGCACCTGCTCCTGTGGCAGTCCTCCCTGGTTCAGGTTCTGTTAGGAGTGTCTTGGAGAATGCTGCTGTTGCTTCcaattcttcatcttctgTAAATCAGTCTACTTCCATAAAGGAGGAAGAGATTAATAGCTTTCCTGGACGGAAACCATCTCCATCACTTTCTGATGCTGCACTTGTGAGGGGCATTGGCAGAAACAGCCTCTCAAATCAAGCATCATCTAGTATCCCACTTGGTTATGGTAACATGGTTTCCAGTAATGGGGCTCTTGGTTCAGTGCCTTCAGCATCTGAAATAACTAAGAGAAATATATTGGGGGCTGATGATAGACTTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCCATAAGTAATAGAATGATCTTGCCTCAGGCTGTGAAAGCTAATGATACTGCTGGCTCAGTTGACTCTGGTAATGTTAGTGATGCTGCAGCTGTGTCTGGGAGagttttttccccttctgTTGTTCCTGGCATGCAATGGAGACCTGGAAGCCCCTTTCAGAACCAGAATGAGGCGgggCAGCTTCGTGGAAGAACTGAGATAGCTCCTGAtcaaagagagaaatttttgCAGAAGTTTCAACAAGTGCAGCAACAAGGGCATAGTACCCTTCTTGGTATGCCTCCCCTTGGTGGAGGAAATCAGAAGCAGTTTTCTGCCCAGCAGCAAAACTCTCTTTTGCAGCAGTTTAACTCTCAAGGCTCACCTGTTTCTTCTCAATCTGGTCTGGGACTTGGAGTTCAGGCACCAGGTCTCAATAGTATATCATCTTCCTCATTGCAGCAGCCTCCCAATTCTATGCATTCACCATCTAACCAACAGCCATTAATGTCAAGTTTTTCTAAGGATGGCGATATTATTAGCAGTTCCAAGGTCGAAGAGCAGCAACAACAGCAAAATTTTCCGGAAGATTCTGTTACTGAATCTACTGCTAGTAATGGGCTTGGCAAGAATCTCATAAATGAGGATGATTTGAAATCCCCGCATGTTGTAGATTCTTCTGCAGGAGTATCTGGCTCTCTTCCTGAGCCTGTTCAAGCTTCTAGAGATATTGATCTGTCTCCTGGCCAACCTTTACAATCCAGTCAACCTTCTGGAAACCTTGGTGTAATTGGAAGGAGAAGTGTAGCTGACCTTGGAGCCATTGGAGATAATTTTAGTGGATCAAGTATTAATTCTGGAGGAGTCCGTGATCAGTTTCATAATTTGAAGATGCTTGAGACAGCATATTTAAAACTTCCACAACCTAAAGACTCAGAACGTCCTAGGATTTATACTCCTAGGCACCCAACAGCTACCCCTCCTAGTTATCCACAAGTACAGGCACCGATTGTTAATAATCCTGCCTTTTGGGAGAGAGTAGGTCTCGAACCATATGGTACTGACACCCTGTTCTTTGCATTTTATTACCAACAGAACACTTATCAACAATATTTAGCAGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACAGAAAGTATAACACCTGGTTTCAACGGCATGAAGAGCCAAAAGTTGCTACAGATGAATATGAGCAGGGAACATATGTCTACTTTGATTTCCATATTGCAAATGATGACCTGCAACATGGGTGGTGTCAAAGAATCAAGACCGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTATTGTATA 2714 0.4204 MAASRKLQGEIDRVLKKVQEGLEVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLVQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAELEGLSVKKGKTRPPRLTHLETSITRHKAHIKKCEWILRLLDNDELSPEQVNDVKDFLDDYMERNQEDFDDFSDVDELYSSLPLDKVESLEDLVTIGPPGVVKGPAVSVKTTSAASASASQTSEQADDTASQDSNSDIVARTPPLKSSGISSAASTPVVNHSPSVPPNILVHSPSGAPAPVAVLPGSGSVRSVLENAAVASNSSSSVNQSTSIKEEEINSFPGRKPSPSLSDAALVRGIGRNSLSNQASSSIPLGYGNMVSSNGALGSVPSASEITKRNILGADDRLGSSGMVQPLVSPISNRMILPQAVKANDTAGSVDSGNVSDAAAVSGRVFSPSVVPGMQWRPGSPFQNQNEAGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLGMPPLGGGNQKQFSAQQQNSLLQQFNSQGSPVSSQSGLGLGVQAPGLNSISSSSLQQPPNSMHSPSNQQPLMSSFSKDGDIISSSKVEEQQQQQNFPEDSVTESTASNGLGKNLINEDDLKSPHVVDSSAGVSGSLPEPVQASRDIDLSPGQPLQSSQPSGNLGVIGRRSVADLGAIGDNFSGSSINSGGVRDQFHNLKMLETAYLKLPQPKDSERPRIYTPRHPTATPPSYPQVQAPIVNNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00173 890 Coils Coil 41 61 - -
Bva03g00173 890 Gene3D - 731 885 IPR038635 -
Bva03g00173 890 PIRSF NOT_su_3_5 1 890 IPR012270 GO:0006355|GO:0030015
Bva03g00173 890 MobiDBLite consensus disorder prediction 528 706 - -
Bva03g00173 890 Coils Coil 139 159 - -
Bva03g00173 890 MobiDBLite consensus disorder prediction 550 653 - -
Bva03g00173 890 MobiDBLite consensus disorder prediction 350 380 - -
Bva03g00173 890 MobiDBLite consensus disorder prediction 265 312 - -
Bva03g00173 890 Pfam NOT2 / NOT3 / NOT5 family 746 884 IPR007282 GO:0006355
Bva03g00173 890 MobiDBLite consensus disorder prediction 689 705 - -
Bva03g00173 890 MobiDBLite consensus disorder prediction 350 368 - -
Bva03g00173 890 PANTHER CCR4 NOT-RELATED 1 890 IPR040168 GO:0030015
Bva03g00173 890 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Bva03g00173 890 PANTHER BNAA10G16600D PROTEIN 1 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00173 Bva-Chr3 1074511 1083756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00173 K12580 - gmx:100783415 1360.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01958 04 19702874 19711730 Bva03g00173 03 1074511 1083756 BWGD