Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01771 ATGGGCTTGATTTCTGGGATTTTTATGGGAATGCTATTCGGCATTGCATTGATGGCTGGATGGCAGCGCATGATGAAGTACCGAAGCGCCAAGCGAATTGCAAAGGCAGCTGACATAAAACTCCTTGGATCACTTAACAGAGatgatttgaagaaaatttgtgGCGACAATTTTCCAGAATGGATATCTTTTCCTGTATATGAGCAGGTGAAATGGCTGAATAAGCAATTGAGCAAAATGTGGCCATTTGTGGCAGATGCTGCAACATTGATTATCAGAGACTCAGTTGAACCACTACTGGAAGAATACAGACCTCCTGGAATCACATCATTGAAGTTCAGCAAACTGTCTCTTGGAAATGTTGCTCCAAAGATCGAAGGTATTCGTGTTCAAAGTCTTAATGAAGGTCAAATCACTATGGACATTGATCTCCGATGGGGTGGTGATCCCGACATTATTTTGGCAGTTGAAGCTGCACTTGTTGCATCAATTCCTATTCAGTTGAAAGATCTTCAAGTTTTCACCATTGTCCGTGTGATCTTCCAACTTGCTGAAGAGATACCATGCATTTCGGCTGTGGTTGTTGCTCTACTTCCTGAGCCAAAACCAAGATTTGATTACACTCTGAAAGCTGTTGGTGGAAGCTTGACAGCAATTCCAGGAATTTCAGATATTATTGATGATATTATGAACTCAATTGTTACTGATATGCTCCAATGGCCTCATAGGATTGTTGTTCCAATCGGTGGTATACCTGTTGATCTTAGTGAATTGGAGCTTAAACCACAAGGAAAACTTACAGTGACAGTTGTGAAAGCAACTAGTTTAAAGAACATGGAAATGATTGGGAAGTCTGATCCTTATGTGGTTTTGTACATTCGACCATTATTTAAGGTTAAAACAAAAGTTGTTGACAATAACCTGAATCCTCGTTGGGATGAGACATTTGAATTGATTGCAGAAGACAAGGAGACGCAGTCACTCATTCTTGAGGTTCATGATGAAGACATTGGGCAAGATAAGCGATTGGGAATAGTAAAATTACCTTTAATTGTTCTGGAAGCAGAAACTCCAAAGGAAATTCAATTGAGGCTGCTTTCATCATTGGACACAATAAAGGTGAAAGACAAGAAGGATCGAGGAAGCTTGACGATTAAGGTCTTTTATCATCAGTTTAACAAGGAAGAGCAACTGGTTGCTCTAGAAGCAGAGAAAAAGATACTagatgaaaggaagaaattgaaagaggCAGGAGTTATAGGAACCACGATGGATGCAGTTGGCTCTGGTGTCGAAATGGTTGGTAGTGGAGTTGTTGCCGGTGCTGGATTTGTTGGCAGTGGCGTTACTGCTGGCGCTGGGCTTGTGGGAAGTGGCATTGGCGCCGGAGCTGGGCTTGTGGGCAGTGGCATTGGCGCCGGAGCTGGGCTTGTGGGAAGTGGCATTGGCGCCGGAGCTGGGCTTGTGGGAAGTGGCGTTGGCGCCGGAGCTGGGCTTGTTGGGAGTGGTCTTGGAGCTGTTGGCAGTGGATTAAGCAAGGCAGGGAAGTTTGTAGGCAGGACTATCACAGGTTCGAGCGGCAGCAAAAGAAGTGGTGCGACTACTCCTGTCACAAATGCACAAGAAACTGGTGGTGGTGCAAAGCCTCGGTG 1652 0.4346 MGLISGIFMGMLFGIALMAGWQRMMKYRSAKRIAKAADIKLLGSLNRDDLKKICGDNFPEWISFPVYEQVKWLNKQLSKMWPFVADAATLIIRDSVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLNEGQITMDIDLRWGGDPDIILAVEAALVASIPIQLKDLQVFTIVRVIFQLAEEIPCISAVVVALLPEPKPRFDYTLKAVGGSLTAIPGISDIIDDIMNSIVTDMLQWPHRIVVPIGGIPVDLSELELKPQGKLTVTVVKATSLKNMEMIGKSDPYVVLYIRPLFKVKTKVVDNNLNPRWDETFELIAEDKETQSLILEVHDEDIGQDKRLGIVKLPLIVLEAETPKEIQLRLLSSLDTIKVKDKKDRGSLTIKVFYHQFNKEEQLVALEAEKKILDERKKLKEAGVIGTTMDAVGSGVEMVGSGVVAGAGFVGSGVTAGAGLVGSGIGAGAGLVGSGIGAGAGLVGSGIGAGAGLVGSGVGAGAGLVGSGLGAVGSGLSKAGKFVGRTITGSSGSKRSGATTPVTNAQETGGGAKPR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01771 550 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 481 546 IPR045050 GO:0008289
Bva02g01771 550 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 484 IPR045050 GO:0008289
Bva02g01771 550 MobiDBLite consensus disorder prediction 522 550 - -
Bva02g01771 550 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 391 IPR035892 -
Bva02g01771 550 Gene3D C2 domain 259 417 IPR035892 -
Bva02g01771 550 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
Bva02g01771 550 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 481 546 - -
Bva02g01771 550 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 484 - -
Bva02g01771 550 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Bva02g01771 550 SMART C2_3c 265 362 IPR000008 -
Bva02g01771 550 CDD C2 266 362 - -
Bva02g01771 550 MobiDBLite consensus disorder prediction 522 542 - -
Bva02g01771 550 Pfam C2 domain 264 359 IPR000008 -
Bva02g01771 550 PRINTS C2 domain signature 328 336 IPR000008 -
Bva02g01771 550 PRINTS C2 domain signature 281 293 IPR000008 -
Bva02g01771 550 PRINTS C2 domain signature 306 319 IPR000008 -
Bva02g01771 550 ProSiteProfiles C2 domain profile. 247 365 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01771 Bva-Chr2 19927131 19931593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01771 266 363 Lipid Metabolism Gene Families AT4G00700 35.714 3.07e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01771 - - gmx:100798484 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00834 01 5998809 6005555 Bva02g01771 02 19927131 19931593 BWGD