Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01556 ATGGCGACCATGAACCTATTCGAGTTATTGGGTGATGATGCAGAGGACCCGTCGCAGCAGATTCAAGCCGAGCAGCAGAAGGCTGTGGTAGCTCCGGTGAAGAAGGCACCGGCTCAGGGCCAGGGCAAGCCGGGAGCTGCTTCTGCTCAGCCTCTGCAGAATAAGTCGGCTCCTTTTCCTTCCAAGCCAGCCCCTCCCGCTCAGGCTGTGAGGGAGGCGAAGTATGAAACTTCTCGTGGAGGCCGTGGAGGTGGACGAGGCGGTGGGCGAGGATATGGGCGTGGTCGTGGAAGTGGTGGTTTCAACCGTGACTCTTATAATGATGAGAACTCATTTGCATCTCCTGCAGCCCCTGCAGGTGCACTTGAGGAAGGAGAAACTGGTAGATCCTCAGAAAGACGTGGTTATGGTGGATCGCGTGGTCCTTACCGTGGTGGTGGTGGTCGTGGTGGTTACAGCAATGGAGAAGTTGGTGATGAGGGACGCTCTCATAGGCCATTTGATCGCCGCAGTGGGACTGGAAGGGGAAATGAACTCAAACGTGAAGGTTCTGGGCGTGGGAACTGGGGGACACcaaatgatgaaattgatCAGGTCACAGAGGAAGTTGTGAATGAAACAGAGAGGAACTTGGTTGATGAGAAGCCTGCTGGTGAGGAAGAGGTAGCTGATGGAAACAAAGAGAGTCCTACTAATGAGGATGGAGAGAAAGAGCCCGAGGATAAGGAGATGACTTTGGCGGAATATGAGAAAGTGcttgaagagaaaaggaaggtCCTTGCAGCAGTTAAGACCGAGGAGAGGAAAGTGGATGTCAAAGAATTTGCATCCATGCAGCAGCTGTCTaacaagaaagataataaTGACATCTTCATCAAATTGGGATCTGAAAAGGATAAGCGCAAGGAGGCTTttgagaaggaagagagatccAGGAAGGCTGTCAGCATTAACGAGTTTCTGAAGCCTGCCGAAGGGGAAAGGTACTATAACCCAGGTGGTCGTGGTCGGGGCCGTGGGCGTGGCCCAAGAGGAGGTTATGGTGGCAACGCAGGCAGCAAAGTATCAGCTCCAGCAATTGCAGATCCTGGGCAGTTCCCAACCTTGGGTGGCAAGTG 1118 0.5045 MATMNLFELLGDDAEDPSQQIQAEQQKAVVAPVKKAPAQGQGKPGAASAQPLQNKSAPFPSKPAPPAQAVREAKYETSRGGRGGGRGGGRGYGRGRGSGGFNRDSYNDENSFASPAAPAGALEEGETGRSSERRGYGGSRGPYRGGGGRGGYSNGEVGDEGRSHRPFDRRSGTGRGNELKREGSGRGNWGTPNDEIDQVTEEVVNETERNLVDEKPAGEEEVADGNKESPTNEDGEKEPEDKEMTLAEYEKVLEEKRKVLAAVKTEERKVDVKEFASMQQLSNKKDNNDIFIKLGSEKDKRKEAFEKEERSRKAVSINEFLKPAEGERYYNPGGRGRGRGRGPRGGYGGNAGSKVSAPAIADPGQFPTLGGK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01556 372 Coils Coil 246 266 - -
Bva02g01556 372 MobiDBLite consensus disorder prediction 1 243 - -
Bva02g01556 372 MobiDBLite consensus disorder prediction 326 372 - -
Bva02g01556 372 SMART HABP4_PAI_RBP1_2 163 271 IPR006861 -
Bva02g01556 372 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 372 IPR039764 GO:0003723
Bva02g01556 372 MobiDBLite consensus disorder prediction 202 243 - -
Bva02g01556 372 Pfam Stm1 1 84 IPR019084 -
Bva02g01556 372 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 372 - -
Bva02g01556 372 MobiDBLite consensus disorder prediction 158 182 - -
Bva02g01556 372 Gene3D - 161 274 - -
Bva02g01556 372 Pfam Hyaluronan / mRNA binding family 164 270 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01556 Bva-Chr2 18470265 18474043 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01556 K13199 - gmx:100791259 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01556 02 18470265 18474043 Bva01g00635 01 4668901 4674998 BWGD
Bva02g01556 02 18470265 18474043 Bva02g01556 02 18470265 18474043 ECH