Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00635 ATGGCGACCGTCAACCTGTTTGAGTTGTTGGGTGATGATGCGGAGGATCCGTCGCAGCAAATTGTAGCTGAGCAGCAGAAGGTTGTGGCGCCGCCGCCGAAGAAGGCTCCGGCTCAGGGTAAGACCGGAGCTGCTCCTGCTCAGGCTCAGCAGAACAAGCAGGCCCAGCTACCTTCTAAGCCTCTTCCTCCAGCTCAGGCTGTGAGGGAGGCGAAAAATGATTCTTCTCGTGGAGGCCGTGGAGGTGGACGAGGAAGTGGTCGTGGTTATGGACGTGGTCGTGGCAGTGGTTTTAACCGTGACTCCTCCAATGATGATAACTCATTTGCTGCTACGGGAGCCTCTGCTGGTCAAGGTGCTCTTGAAGAAGGAGTGACTGAGAGGTCCTCGGAGAGACGTGGTTATGGTGGACCTCGTGGTCCTTACCGTGGTGGTCGTCCTGGTGGTTTCAACAATGGAGAACTTGGTGAAGAGGGACGGCCTCGAAGGACATTTGAACGCCGCAGTGGGACTGGACGTGGAAATGAAATCAAGCGTGAGGGTTCTGGACTTGGGAACTGGGGAACGCCAAATGATGAAATTACTGAGGGCACTGAGGAAGTTGTGAATGTGATGGAGAAGGCTTTGGATGATCAGAAGCCTGCAGGTGAGGAAGAGATAGCAGAAGGAAACAAGGAGAGTCCTACTAACGAGGCTGAAGATAAAGAACCTGAGGAAAAGCAAATGACTTTGGAAGAATATGAGAAAGTGctggaagagaaaaggaaggcCTTTGCTGCACTTAAGACTGAGGAGAGAAAGGTTGATGTTAAAGAATTTGAATCCATGCAACAGATTTCAAGCAAGAAAAACAATGATGACATCTTTATTAAGTTGGGATCTGAAAAGGATAAGCGCAAGGAGGCTTTTgataaggaagagaaagctAGAAAGGCTGTCAGCATTAATGAGTTTCTGAAGCCTGTCGATGGGGAGAGGTATTACAGCCCCGGGGGCGTGGCCGTGGCCGAGGTCGAGGCCCGAGAGGTTATGGTGGCAATTCATACAGCAACGCACCAGCTCCTTCAATTGGAGATCCCGGCCAGTTCCCAACTTTGGGTGGCAAATAATCCAATCAACAAACGAAAAGGAAATGGTGTCAAACTTACAATTCCAAAGAATAGATGCCAGTA 1172 0.4881 MATVNLFELLGDDAEDPSQQIVAEQQKVVAPPPKKAPAQGKTGAAPAQAQQNKQAQLPSKPLPPAQAVREAKNDSSRGGRGGGRGSGRGYGRGRGSGFNRDSSNDDNSFAATGASAGQGALEEGVTERSSERRGYGGPRGPYRGGRPGGFNNGELGEEGRPRRTFERRSGTGRGNEIKREGSGLGNWGTPNDEITEGTEEVVNVMEKALDDQKPAGEEEIAEGNKESPTNEAEDKEPEEKQMTLEEYEKVLEEKRKAFAALKTEERKVDVKEFESMQQISSKKNNDDIFIKLGSEKDKRKEAFDKEEKARKAVSINEFLKPVDGERYYSPGGVAVAEVEAREVMVAIHTATHQLLQLEIPASSQLWVANNPINKRKGNGVKLTIPKNRCQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00635 390 Coils Coil 244 264 - -
Bva01g00635 390 Gene3D - 159 272 - -
Bva01g00635 390 MobiDBLite consensus disorder prediction 44 59 - -
Bva01g00635 390 Pfam Stm1 1 82 IPR019084 -
Bva01g00635 390 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 331 - -
Bva01g00635 390 MobiDBLite consensus disorder prediction 25 243 - -
Bva01g00635 390 Pfam Hyaluronan / mRNA binding family 161 268 IPR006861 -
Bva01g00635 390 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 331 IPR039764 GO:0003723
Bva01g00635 390 MobiDBLite consensus disorder prediction 156 175 - -
Bva01g00635 390 MobiDBLite consensus disorder prediction 97 114 - -
Bva01g00635 390 MobiDBLite consensus disorder prediction 203 243 - -
Bva01g00635 390 SMART HABP4_PAI_RBP1_2 161 269 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00635 Bva-Chr1 4668901 4674998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00635 K13199 - gmx:100814825 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01556 02 18470265 18474043 Bva01g00635 01 4668901 4674998 BWGD
Bva01g00635 01 4668901 4674998 Bva01g00635 01 4668901 4674998 ECH