Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01212 ATGGCGAACCGTTCACATGTGCCAAAATTTGGCAATTGGGAAGGTGAAGAGAGTGTTCCTTACACAGCATATTTTGACAAAGCCCGGAAGGGACGAACTGGAACAAAGATGATAAACCCAAATGATCCCGAGGAAAATGCGGGATTAGCTCCTGATGATTCATCTATTGATCTGCCCCCTTCCAAACCCAGAGTTGATAAAGAAGTGCCTGTTGGTAGGGGATCAGGGAGATCATCAAATGAGTTGCAAAGGAGCAGGGAGGATGGTGATCCTAAGCAGTTCATTGACTCTCCTGCTCGTCAGGGAGTAGGTTCTGCTGAAACCCGGAGAAGATCTTCAAGACAAAGTGCTGGGTCTGAACACAGTGTTGAGCGTTCACCCCTTCATCGCCAGGCAAGAGCCCCGGGTAGAGACAGTCCCTCCTGGGAACCAAAGAGTTATGACAGTAGCCATGGTACACCCGGAAGATCCAAACTTAGACCAGTCAATCGAGGCGATGAAACTCCAGATAGAGGTGCTGCTGTTCCAAAGTTTGGTGAGTGGGATGAGAGCAACCCCGCGTCAGCTGATGGCTACACTCACATTTTCAACAAGGTGCGGGAGGAGAGACATGGGGGCGCTGGAAATGTGTCAGGCACGCCTAATGAGAGCACATATGGCCGGAACCAAGCTACCCATGACAAAGCCCAGACTTGCTGTTTTTGGTGGCGCAGCAAAAAATG 722 0.5028 MANRSHVPKFGNWEGEESVPYTAYFDKARKGRTGTKMINPNDPEENAGLAPDDSSIDLPPSKPRVDKEVPVGRGSGRSSNELQRSREDGDPKQFIDSPARQGVGSAETRRRSSRQSAGSEHSVERSPLHRQARAPGRDSPSWEPKSYDSSHGTPGRSKLRPVNRGDETPDRGAAVPKFGEWDESNPASADGYTHIFNKVREERHGGAGNVSGTPNESTYGRNQATHDKAQTCCFWWRSKK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01212 240 MobiDBLite consensus disorder prediction 160 177 - -
Bva02g01212 240 MobiDBLite consensus disorder prediction 30 189 - -
Bva02g01212 240 MobiDBLite consensus disorder prediction 113 132 - -
Bva02g01212 240 MobiDBLite consensus disorder prediction 203 224 - -
Bva02g01212 240 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 169 204 IPR008700 -
Bva02g01212 240 MobiDBLite consensus disorder prediction 210 224 - -
Bva02g01212 240 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 236 IPR040387 -
Bva02g01212 240 MobiDBLite consensus disorder prediction 80 94 - -
Bva02g01212 240 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01212 Bva-Chr2 16338443 16343320 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01212 K13456 - gmx:100499220 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00399 01 3286428 3291012 Bva02g01212 02 16338443 16343320 BWGD