Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00399 ATGGCTAACCGTTCTCATGTGCCAAAATTTGGTAATTGGGAAGGTGAAGGGGATGTTCCTTATACAGCATATTTTGATAAGGCCCGGAAAGGGCGAACTGGTACAAAGATGATAAACCCGAATGATCCTGAGGAAAATGCAGATTTAGTTCCTAATGATTCATCTACTGACCATCCCCCTCCAAAACCCAGAGTTGATTCAGAAGTGCCACTTGGAAGGAGACCAGGGAGATCATCATATGAGTTGCAAAAGAGCAAGGATGAAGGTGATCCTAAGCAGTTCATTGACTCTCCTGCTCGTCATGACAATGCTGGCAATAGAAATTCTAGTGACTCTCTACAACGTCATGGAGTTGGTTCTGCTGAAACCCGAAGAAGATCTGCAAGGCAAAGTGCTGGGTCTGAATACAGTGTTGAGCGATCGCCCCTTCATCGCCAGGCCAGAGCCCCAGGCAGAGATAGTCCCTCTTGGGAAGGAAAAAGTTATGACAGTAGCCATGGTACACCTGGAAGATCCAAACTTAGACCAGTTAATCGAGGCGATGAAACACCTGATAGGGGTGCTGCTGTTCCGAAATTTGGCGAGTGGGATGAGAGCAACCCTGCATCAGCTGATGGCTATACTCACATTTTCAACAAGGTGCGGGAGGAGAGACAGGGCGGGGCTGGAAATGCTCCCGGTACTCCTAATGAGAGATCACATGTTGTCCGGAACCAAGCTAATAATGAAAAAGCCCAGAATTGCTGCTTTTGGTGGTGCAGCAAAAAATG 770 0.474 MANRSHVPKFGNWEGEGDVPYTAYFDKARKGRTGTKMINPNDPEENADLVPNDSSTDHPPPKPRVDSEVPLGRRPGRSSYELQKSKDEGDPKQFIDSPARHDNAGNRNSSDSLQRHGVGSAETRRRSARQSAGSEYSVERSPLHRQARAPGRDSPSWEGKSYDSSHGTPGRSKLRPVNRGDETPDRGAAVPKFGEWDESNPASADGYTHIFNKVREERQGGAGNAPGTPNERSHVVRNQANNEKAQNCCFWWCSKK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00399 256 MobiDBLite consensus disorder prediction 30 205 - -
Bva01g00399 256 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 252 - -
Bva01g00399 256 MobiDBLite consensus disorder prediction 79 97 - -
Bva01g00399 256 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 184 219 IPR008700 -
Bva01g00399 256 MobiDBLite consensus disorder prediction 102 117 - -
Bva01g00399 256 MobiDBLite consensus disorder prediction 175 192 - -
Bva01g00399 256 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 252 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00399 Bva-Chr1 3286428 3291012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00399 K13456 - gmx:100499218 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00399 01 3286428 3291012 Bva02g01212 02 16338443 16343320 BWGD