Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00475 ATGGCAAGCCTCAAGGTTGCAATGGTGGTGCTCATGTGCATGGCTGTGATGGGTGCACCCATCACCCAGGCAACCATCACCTGTGGTCAGGTCACTTCCGCCGTAGCAGCGTGCCTAAGTTACGTCACAGACAAAGGAGACCTTACTACGGCCTGCTGTGACGGCGTCAAGAAACTTGCTGCCGCCGCAAAGACCACCGCTGACAAACAGGCAGCCTGCAGATGCTTGAAATCTGCTGCTGCTAGTATACCTAATCTCAACGCGGGCAAAGCTGCCGGTCTTCCAGGCAAATGCGGAGTCAACGTTCCTTTCAAGATCAGCACCTCCACCAACTGTGACACCATCAAGTTCTG 353 0.5467 MASLKVAMVVLMCMAVMGAPITQATITCGQVTSAVAACLSYVTDKGDLTTACCDGVKKLAAAAKTTADKQAACRCLKSAAASIPNLNAGKAAGLPGKCGVNVPFKISTSTNCDTIKF 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00475 117 Pfam Protease inhibitor/seed storage/LTP family 28 112 IPR016140 -
Bva02g00475 117 ProSitePatterns Plant lipid transfer proteins signature. 94 115 IPR000528 GO:0006869|GO:0008289
Bva02g00475 117 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Bva02g00475 117 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Bva02g00475 117 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Bva02g00475 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Bva02g00475 117 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Bva02g00475 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 3 113 - -
Bva02g00475 117 SMART aai_6 28 112 IPR016140 -
Bva02g00475 117 CDD nsLTP1 26 113 - -
Bva02g00475 117 Gene3D - 25 116 IPR036312 -
Bva02g00475 117 PANTHER - 3 113 IPR000528 GO:0006869|GO:0008289
Bva02g00475 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 115 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00475 Bva-Chr2 6200138 6201241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00475 4 116 Acyl Lipid Metabolism Gene Families AT2G38540 50.877 1.72e-35 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00475 - - pvy:116130510 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00168 01 1369067 1370132 Bva02g00475 02 6200138 6201241 BWGD