Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00168 ATGGCAAGTCTCAAAGTTGCAATGGTGTTACTCATTTGCATGGCTGTCATGGCTGCACCCATCACTCTGGCAGCCATCTCATGTGGTCAGGTCAGTTCCGCCCTAGCACCATGCATCAAGTACCTTACCAGCACCGCACCGCTTGCTCCGCCGTGCTGTGCCGGAGTCAAGAGCGTTGCAGCCGCGGCACAGACCCCTGCCGACAAACAAGCCGCCTGCAACTGCATGAAGTCAGCTGCTGGTCAAATCTCTAACCTCAACCCTGATAAAGCTGCGAGTCTCCCAGGCAAATGCGGTGTCAACATCCCTTACAAGATCAGCACTTCCACCAACTGCGCTACTATCAAGTTCTG 353 0.5467 MASLKVAMVLLICMAVMAAPITLAAISCGQVSSALAPCIKYLTSTAPLAPPCCAGVKSVAAAAQTPADKQAACNCMKSAAGQISNLNPDKAASLPGKCGVNIPYKISTSTNCATIKF 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00168 117 Gene3D - 25 116 IPR036312 -
Bva01g00168 117 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Bva01g00168 117 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Bva01g00168 117 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Bva01g00168 117 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Bva01g00168 117 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Bva01g00168 117 ProSitePatterns Plant lipid transfer proteins signature. 94 115 IPR000528 GO:0006869|GO:0008289
Bva01g00168 117 PANTHER - 3 113 IPR000528 GO:0006869|GO:0008289
Bva01g00168 117 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 3 113 - -
Bva01g00168 117 Pfam Protease inhibitor/seed storage/LTP family 28 112 IPR016140 -
Bva01g00168 117 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 114 IPR036312 -
Bva01g00168 117 SMART aai_6 28 112 IPR016140 -
Bva01g00168 117 CDD nsLTP1 26 112 - -
Bva01g00168 117 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00168 Bva-Chr1 1369067 1370132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00168 24 116 Acyl Lipid Metabolism Gene Families AT5G59310 59.140 1.05e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00168 - - mtr:MTR_4g428370 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00168 01 1369067 1370132 Bva02g00475 02 6200138 6201241 BWGD