Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g00450 ATGGTTGCAGCTGAAGTAATTGCCCAGAAAACCCTTCAGGGTGTTCCTATCTTGGCAAGAGACAacaatttttcatcttctcccAGAAGGTTGGAAGGCAAAGTTGCTATTGTAACTGGGGGAGCCAGAGGCATTGGAGAAGCAACTGTTCGAGTTTTTGTCAAGCACGGTGCCAAGGTAGTGATTGCTGATGTTGAGGACACACTTGGATCAATGTTGGCAGAGATATTAGCTCCCTTTGCAACCTTTGTCCACTGCGATGTTGGCTCAGAACAAGACGTTGAAAACTTAGTCAATTTCACAGTTTCTCGCCATGGACAACTTGACATCATCTTCAACAATGCTGGGGTTCTTGGGAATCAATCCAAGCACAATAGCATTCTCGATTTCGATGCCGAGGAATTCGACAAAATCATGCGTGTGAATGTGAAGGGGGTGGCTCTAGGCATCAAGCATGCATCAAAAGTGATGATTCCAAGAGGAATTGGGTCCATAATTTCCACTGCTAGTGTTGCAGGAGTCATGGGAGGGCTTGGACCACATGCTTACACGGCTTCAAAGCATGCCATAGTTGGGCTAACAAAGAACACAGCCTGTGAATTAGGGAAGTATGGAATTAGAGTCAATTGCATTTCTCCATTTGGGGTGGCCACATCAATGCTGGTTAATGCTTGGAGAAGTAGATTTACCGacgaagaagatgatgatgaagaaagcATTATGAATTGTGGGCTGCTCTGCCATGAAGTAGAGAAAATGGAGGAATTCGTTAGAGGGTTGGCTAACTTGAAAGGGGCAACGTTGAGAGCTAGTGATATTGCCGAGGCTGCACTTTATCTTGCTAGTGATGAATCCAAGTATGTTAGTGGTCATAACCTTGTTGTGGATGGTGGAATCACATCCTCAAGAAATTGCGTTAGACTCTA 926 0.4287 MVAAEVIAQKTLQGVPILARDNNFSSSPRRLEGKVAIVTGGARGIGEATVRVFVKHGAKVVIADVEDTLGSMLAEILAPFATFVHCDVGSEQDVENLVNFTVSRHGQLDIIFNNAGVLGNQSKHNSILDFDAEEFDKIMRVNVKGVALGIKHASKVMIPRGIGSIISTASVAGVMGGLGPHAYTASKHAIVGLTKNTACELGKYGIRVNCISPFGVATSMLVNAWRSRFTDEEDDDEESIMNCGLLCHEVEKMEEFVRGLANLKGATLRASDIAEAALYLASDESKYVSGHNLVVDGGITSSRNCVRL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g00450 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 106 117 IPR002347 -
Bva02g00450 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 171 IPR002347 -
Bva02g00450 308 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 183 202 IPR002347 -
Bva02g00450 308 Gene3D - 21 307 - -
Bva02g00450 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 300 IPR036291 -
Bva02g00450 308 Pfam Enoyl-(Acyl carrier protein) reductase 40 226 - -
Bva02g00450 308 Pfam Enoyl-(Acyl carrier protein) reductase 250 300 - -
Bva02g00450 308 CDD secoisolariciresinol-DH_like_SDR_c 30 300 IPR045309 GO:0016616
Bva02g00450 308 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 4 308 - -
Bva02g00450 308 PRINTS Glucose/ribitol dehydrogenase family signature 204 221 IPR002347 -
Bva02g00450 308 PRINTS Glucose/ribitol dehydrogenase family signature 183 202 IPR002347 -
Bva02g00450 308 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Bva02g00450 308 PRINTS Glucose/ribitol dehydrogenase family signature 35 52 IPR002347 -
Bva02g00450 308 PRINTS Glucose/ribitol dehydrogenase family signature 106 117 IPR002347 -
Bva02g00450 308 PRINTS Glucose/ribitol dehydrogenase family signature 263 283 IPR002347 -
Bva02g00450 308 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 4 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g00450 Bva-Chr2 6013876 6015014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g00450 31 300 Acyl Lipid Metabolism Gene Families AT1G63380 32.384 8.75e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g00450 - - gmx:100790562 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g00450 02 6013876 6015014 Bva01g00146 01 1137863 1139041 BWGD
Bva02g00450 02 6013876 6015014 Bva02g00450 02 6013876 6015014 ECH