Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1075 ATGACCGAGGTCCTGCATTCCCCATCCCATTTTTCTTCCTCCTCAAGGAGAAGCTCTTCCGCTTCGTCTTCTCTGTCACGTGCGCCCCTATCTTCATTGTCTTGCACAGCCCCTTTCGGCGATGGCATTTTCGTCATTAGCGACCAAGAACCTCCGTCGCCGTCTTCTGTAGCCGTGGACGATTGTTCAGGGACGACGAACTGTGACACCGAGGAGCTGAGGGAGAGGGACGGGCACCGGACAGAACAGCTTTCTGTTCTGGCGCTTCTTGTGACCCTTTTCAGGAAATCCCTGGTTGCTTGTAAGAGTGACAGGAGGGAGCTCTGCGCAATGGAGATCGGATGGCCATCTAATGTGCGCCATGTTGCACATGTCACGTTTGATAGGTTCAATGGTTTCTTGGGCTTGCCGGTCGAATTCGAACCTGAAGTGCCCAGAAGGCCTCCGAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACGGAATCTATGCAATTATCATATGACTCAAGAGGGAACAGTGTACCAACAATTCTGTTACTAATGCAAAGACGCTTATATGCTCAAGGAGGGCTGCAGGCAGAGGGCATTTTCAGAATCAACGCAGAAAATAGTCAAGAGGAATATGTTAGGGACCGATTAAATAGCGGAGTGGTCCCACAAGGCGTTGATGTACATTGTCTAGCAGGACTTATTAAGGCTTGGTTTAGGGAACTGCCTAGGGGTGTTCTGGATTCTTTATCAACTGAGCAGGTAATGCAATGCCAGACTGAGGAGGAGTGTGCTGAGTTAGTGAGGCATCTACCTCCGGCTGAAGCTGCTCTCCTGGACTGGGCCATCAATTTGATGGCTGATGTTGTACTACTGAAACATCTGAACAAGATGAATGCACGCAATATTGCCATGGTTTTTGCACCAAACATGACTCATATGGCAGACCCTTTGACCGCATTAATGTATGCGGTTCAAGTGATGAACTTCTTGAAGAACCTTGTATTAAGGACCCTCCGAGAAAGAAAGGATTCAATGATAGAATCTGTTCCTCAGTTTCATTTCGAGCCTTCTGATGAGAATGGGCACCATAGCCCTCTGCAGTCCTGTCAGCAAGATACTAATGAAGAACATGAAGAGGTTAAGGAAAATTTGACTTCTGAGAAAACTGTCTTAGAATGTTCCCCTGACACCCCCCTCCAAAACACTAACTTAACTGGAGCAGAATCTGGCAGTTTGTTAACCTCTTCTGAGCGTCTGGTTTGTGATGGGGATTTATTTTGTGAGTTTTTACCCAAAGGAAATGGGAAGAGTAAGACTGGCCAATCAAGTAATTCAAATACTATGAAGGGCGCACAAAACACCAGAGTGGGGCAACCAACGAACCACGGATCAGTTCCTGTGGAGAAGAGGAGGATTAGCAATCTGAGATGTTATGATTCAAGATCAGAGAGGATAGAAGCCTGGCGGTGA 1461 0.4723 MTEVLHSPSHFSSSSRRSSSASSSLSRAPLSSLSCTAPFGDGIFVISDQEPPSPSSVAVDDCSGTTNCDTEELRERDGHRTEQLSVLALLVTLFRKSLVACKSDRRELCAMEIGWPSNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRRLYAQGGLQAEGIFRINAENSQEEYVRDRLNSGVVPQGVDVHCLAGLIKAWFRELPRGVLDSLSTEQVMQCQTEEECAELVRHLPPAEAALLDWAINLMADVVLLKHLNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMNFLKNLVLRTLRERKDSMIESVPQFHFEPSDENGHHSPLQSCQQDTNEEHEEVKENLTSEKTVLECSPDTPLQNTNLTGAESGSLLTSSERLVCDGDLFCEFLPKGNGKSKTGQSSNSNTMKGAQNTRVGQPTNHGSVPVEKRRISNLRCYDSRSERIEAWR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1075 486 MobiDBLite consensus disorder prediction 51 66 - -
Bisa12g1075 486 Coils Coil 371 391 - -
Bisa12g1075 486 ProSiteProfiles Rho GTPase-activating proteins domain profile. 158 343 IPR000198 GO:0007165
Bisa12g1075 486 MobiDBLite consensus disorder prediction 350 405 - -
Bisa12g1075 486 Pfam P21-Rho-binding domain 112 138 IPR000095 -
Bisa12g1075 486 FunFam Rho GTPase-activating protein 5 143 336 - -
Bisa12g1075 486 MobiDBLite consensus disorder prediction 432 458 - -
Bisa12g1075 486 ProSiteProfiles CRIB domain profile. 113 126 IPR000095 -
Bisa12g1075 486 MobiDBLite consensus disorder prediction 430 462 - -
Bisa12g1075 486 Gene3D CRIB domain 109 141 IPR036936 -
Bisa12g1075 486 SMART PBD_5 113 147 IPR000095 -
Bisa12g1075 486 MobiDBLite consensus disorder prediction 384 405 - -
Bisa12g1075 486 PANTHER MKIAA1688 PROTEIN 1 401 IPR044785 GO:0005096
Bisa12g1075 486 MobiDBLite consensus disorder prediction 51 77 - -
Bisa12g1075 486 SMART RhoGAP_3 172 332 IPR000198 GO:0007165
Bisa12g1075 486 Pfam RhoGAP domain 176 309 IPR000198 GO:0007165
Bisa12g1075 486 SUPERFAMILY GTPase activation domain, GAP 153 331 IPR008936 -
Bisa12g1075 486 CDD CRIB 111 151 - -
Bisa12g1075 486 MobiDBLite consensus disorder prediction 369 383 - -
Bisa12g1075 486 CDD RhoGAP 175 330 - -
Bisa12g1075 486 Gene3D Rho GTPase activation protein 142 350 IPR008936 -
Bisa12g1075 486 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1075 Bisa-ChrBisa12 17410922 17415173 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1075 12 17410922 17415173 Bisa02g3525 02 86940854 86944261 CCT