Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3525 ATGACCGAGATTCTCCATTCCCCTTCCCATTTTTCTTCCTCCTCAAGCAGAAGCTCTTCCTCTTCCTCCTCTTCTTCATTGTCTCGCACAGCGCCTCCCAGTAATGGCATTCTCTCTCTCCAAGAAACGCAGACTCCCCCGTCTTCTGTAGCTGTGCAGCGTTGTTGCACGACGACGTTTTGCTGCGCTGAGGAGCTCAAGGACAAGGAAAAGCACCGGACGGAACAGCTTTCTCTTCTGGCGCTTTTTGAGACGCTTATCAGGAAGTCCTTAACTGCTTGTAAGACTGACAGGAGGGAGCTCTGCCGCGCGATGCAGATCGGATTGCCCACTAACGTGCGTCATGTTGCACATGTCACATTTGATAGGTTCAATGGGTTCTTGGGGTTGCCTGACGAGTTCGAACCTGAAGTGCCTAGAAGACCTCCCAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACGGAATCCATGCAGTTATCATTCGACTCCAGAGGGAACAGTGTGCCAACAATTCTGTTACTAATGCAAAGACGCCTGTATGCTGAAGGAGGGTTGCAGGCAGAGGGCATTTTTAGAATAAATGCAGAAAATAGTCAAGAGGAATGTGTTAGGGAGCAATTAAATAAGGGAGTGGTCCCAGAAGGCATCGATGTACATTGTTTAGCAGGACTTATCAAGGCTTGGTTTAGGGAATTGCCTATAGGCATTCTGGATTCTTTATCCCCAGAGCAGGTAATGCAATGCGAAACTGAAGAGCAGTGTGCTGAACTAGCTAGGAATCTACCTCCTACTGAAGCTGCCCTCTTGGACTGGGCAATCAATCTGATGGCTGACGTTGCCCAACAGGAACATCTGAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTTATTCTAAGGACACTGCGGGAAAGAAAGGATTCTGTTGTAGAATCTTCACCTGGTTTCTATTTAGAGCCTTCTGATGAGAATGGTCACCATAGCCCTGCACAGTTCTGCCAGCATGATTCTGCTAAAGAAAATGACGAGGCTCAGGACATTGTCATCGAAAATACTGCGCTACAATGTTCCCCTGGTCCTGACTCCCTCCAAGACATCAACTTAACTGGAGGAGAAGCTGACAGTTTGGCAACTGAAGATCAAGTATGTAATGAGGACTCGTATCGTAAGTATCCACCTAAAGAAAATGTTGGGAAGAGTAAGACTGGCCAATCAAGCAAATCAAATTCAAGAAAAGGACCCAGAAAAACCAGAGGCCAGCAAACTACGATTCAAGGAACAAAGCCTGTTGAAAAAACCAAGGGAACTGGAAAACTGAGTCGCTCAGAGTCAAGATCAGAGAGGTCAGAACCATGGCGGTGA 1443 0.4671 MTEILHSPSHFSSSSSRSSSSSSSSSLSRTAPPSNGILSLQETQTPPSSVAVQRCCTTTFCCAEELKDKEKHRTEQLSLLALFETLIRKSLTACKTDRRELCRAMQIGLPTNVRHVAHVTFDRFNGFLGLPDEFEPEVPRRPPSASATVFGVSTESMQLSFDSRGNSVPTILLLMQRRLYAEGGLQAEGIFRINAENSQEECVREQLNKGVVPEGIDVHCLAGLIKAWFRELPIGILDSLSPEQVMQCETEEQCAELARNLPPTEAALLDWAINLMADVAQQEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLRERKDSVVESSPGFYLEPSDENGHHSPAQFCQHDSAKENDEAQDIVIENTALQCSPGPDSLQDINLTGGEADSLATEDQVCNEDSYRKYPPKENVGKSKTGQSSKSNSRKGPRKTRGQQTTIQGTKPVEKTKGTGKLSRSESRSERSEPWR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3525 480 CDD CRIB 105 145 - -
Bisa02g3525 480 Gene3D CRIB domain 103 137 IPR036936 -
Bisa02g3525 480 MobiDBLite consensus disorder prediction 425 457 - -
Bisa02g3525 480 Gene3D Rho GTPase activation protein 140 336 IPR008936 -
Bisa02g3525 480 PANTHER MKIAA1688 PROTEIN 1 447 IPR044785 GO:0005096
Bisa02g3525 480 SMART RhoGAP_3 166 329 IPR000198 GO:0007165
Bisa02g3525 480 MobiDBLite consensus disorder prediction 404 480 - -
Bisa02g3525 480 MobiDBLite consensus disorder prediction 337 359 - -
Bisa02g3525 480 ProSiteProfiles CRIB domain profile. 107 120 IPR000095 -
Bisa02g3525 480 SMART PBD_5 107 141 IPR000095 -
Bisa02g3525 480 FunFam Rho GTPase-activating protein 5 137 330 - -
Bisa02g3525 480 Pfam RhoGAP domain 169 303 IPR000198 GO:0007165
Bisa02g3525 480 SUPERFAMILY GTPase activation domain, GAP 147 326 IPR008936 -
Bisa02g3525 480 Pfam P21-Rho-binding domain 106 133 IPR000095 -
Bisa02g3525 480 MobiDBLite consensus disorder prediction 461 480 - -
Bisa02g3525 480 MobiDBLite consensus disorder prediction 1 45 - -
Bisa02g3525 480 ProSiteProfiles Rho GTPase-activating proteins domain profile. 152 337 IPR000198 GO:0007165
Bisa02g3525 480 CDD RhoGAP 169 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3525 Bisa-ChrBisa02 86940854 86944261 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1075 12 17410922 17415173 Bisa02g3525 02 86940854 86944261 CCT
Bisa02g3525 02 86940854 86944261 Bisa02g3525 02 86940854 86944261 ECH