Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1022 ATGGATTGTCGCATCTATGGCGTGACCAAGCTCCGCATCTTCTGCACCTTTCTCCTGCTTCTTCTTTCCGGTTTCCCTCTCGCATTGTCGGAAACGCCGAATCACAGATTGTCGGTCTCGTCTTCTTCGGTGAGTTCCGGTCAGATAAACTCGAACTCCGTTCTGGTGGCTCTTCTGGACTCGCATTACACGGAGCTCGCCGAGCTGGTGGAGAAGGCCATGCTGTTGCAGAGTTTAGAAGACACTGTCGGCAGCCACAACATCACCATCTTCGCGCCCCAAAATGAAGCTCTCGAACGCGATCTAGACCCGGAGTTCAAACGCTTCCTTCTCGAACCCGGGAATCTCAAGTCTCTCCAGAGGTTACTCATGTTTCACATCATTCCGACCCGAATAGGATCAGAACAGCTGCCGATTCAGACCCGGTCGACCCTCCACGAGACGCTTACCAGTGACTGCCTCCACCTCGAAAGCAATGGGACTACGGAATGGACGGTGGATCGCACCAAGATTATCCACCCAGACGCGGTGACCCGACCCGATGGTGTCATCCACGGGATTGAACGCCTCTTGATCCCTCGTTCCGTGCAAGACGACTTCAACCGCCGGCGAAGTCTCCAGTCCATCACGGCAGTGAAGCCGGAGGGAGCGCCAGAGGTTGACCCAAGGACTCATCGGCTCAAGAAGCCCGCTCCGCCAGCAAAACCCGGTTCGCCACCCGCTTTGCCAATCTATGATGCGATGGCTCCTGGGCCCGGGATTGCTCCTGCTCCGGCGCCGGGGCCGGGCGGGGCCCACCACCACTTCAACGGTGAAGCCAAAGTGAAGGATTTCATCCAGACGCTTCTCCATTACGGTGGGTACAATGAAATGGCTGATATATTGGTGAATCTAACTTCCCTAGCCTCCGAAATGGGTCGGCTCGTCTCGGAAGGGTACGTGCTCACTGTTTTGGCTCCCAACGATGAGGCCATGGCTAAATTGACCACGGACCAATTGAGCGAACCGGGCGCACCCGAACAGATAATGTATTACCATCTCATACCGGAGTATCAGACCGAAGAGAGTATGTACAATGCGGTTCGACGGTTCGGTAAGGTCCGGTACAATACCCTGCGGTTACCGCATAAGGTGGTCGCTCAGGAGGCTGATGGGTCGGTGAAGTTCGGGCATGGAGACGGGTCGGCTTATTTATTCGACCCGGATATATATACGGATGGGCGGATCTCGGTGCAGGGGATTGACGGTGTGTTGTTTCCGCTGGAGGAGGAGGGTGCGAAGGCCATTACCAAAACGGTTCAACCCGCTAAGGTCGTGGTCAAGCACAGAAGAGGAAAATTGCTGGAGGCAGCGTGCTGGGTGCTTGGAACCATTGGACAAGATGGCAGATTCACCACTTGCCATTGA 1407 0.5551 MDCRIYGVTKLRIFCTFLLLLLSGFPLALSETPNHRLSVSSSSVSSGQINSNSVLVALLDSHYTELAELVEKAMLLQSLEDTVGSHNITIFAPQNEALERDLDPEFKRFLLEPGNLKSLQRLLMFHIIPTRIGSEQLPIQTRSTLHETLTSDCLHLESNGTTEWTVDRTKIIHPDAVTRPDGVIHGIERLLIPRSVQDDFNRRRSLQSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSPPALPIYDAMAPGPGIAPAPAPGPGGAHHHFNGEAKVKDFIQTLLHYGGYNEMADILVNLTSLASEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYNTLRLPHKVVAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPLEEEGAKAITKTVQPAKVVVKHRRGKLLEAACWVLGTIGQDGRFTTCH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1022 468 Gene3D FAS1 domain 54 194 IPR036378 -
Bisa12g1022 468 ProSiteProfiles FAS1/BIgH3 domain profile. 275 403 IPR000782 -
Bisa12g1022 468 FunFam Fasciclin-like arabinogalactan protein 16 270 421 - -
Bisa12g1022 468 SUPERFAMILY FAS1 domain 254 421 IPR036378 -
Bisa12g1022 468 Gene3D FAS1 domain 267 420 IPR036378 -
Bisa12g1022 468 MobiDBLite consensus disorder prediction 232 246 - -
Bisa12g1022 468 SUPERFAMILY FAS1 domain 55 194 IPR036378 -
Bisa12g1022 468 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 7 467 IPR044654 -
Bisa12g1022 468 SMART fasc_3 316 421 IPR000782 -
Bisa12g1022 468 SMART fasc_3 89 194 IPR000782 -
Bisa12g1022 468 Pfam Fasciclin domain 62 193 IPR000782 -
Bisa12g1022 468 Pfam Fasciclin domain 300 420 IPR000782 -
Bisa12g1022 468 MobiDBLite consensus disorder prediction 211 264 - -
Bisa12g1022 468 ProSiteProfiles FAS1/BIgH3 domain profile. 50 191 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1022 Bisa-ChrBisa12 16430776 16434218 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1022 12 16430776 16434218 Bisa02g3450 02 85691032 85693409 CCT