Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3450 ATGGATCGCCGCATCTATGGCGCCACCCACCTCCGAATCTTCTGCTCCTACCTCCTCCTCCTCTTCGGCTTCGCATTCTCGGATTCCCCAAATACCAGGTTGTCGGTGGCTTCTTCTTCTTCTTCGTCATCGGGTCAAATAAACTCCAACTCGGTCCTCGTGGCACTCCTGGACTCGCATTACACGGAACTCGCTGAGTTAGTGGAAAAGGCTATGCTTTTGCAGACTCTTGAAGACACTGTCGGCAGCCGCAACATCACAATCTTCGCACCCAGAAACGAAGCCCTAGAGCGGGATCTCGACCCAGAATTCAAGCGGTTCCTTCTAGAGCCCCGTAATCTCAAGTCTCTCCAGTCTTTGCTCATGTTTCACGTCATCCCGACCCGAATTAGATCGGAGACTCTGCCCGCTCAATCCGGGTCAACCCGTCACGAAACGCTCTTTAATTCGGAGTTTCTCCATTTTGCGAGTAATGGGACCGGGGAATGGACTGTGGATCGCGCCAGAATTATCCACCCGGATGTGGTGACCCGACCCGACGGCGTGATTCACGGGATTGAACGCCTGCTGGTCCCTCGCTCCGTTCAAGACGACTTCAACCGGCGCCGGAGCCTCCGGTCCATCACGGCCGTGAAGCCGGAGGGGGCTCCGGAAGTTGACCCGAGGACACATCGGCTGAAGAAACCTGCTCCGCCGGCCAAACCCGGGTCGCCGCCGGCATTGCCCATCTACGACGCTATGGCTCCGGGACCTGCCCTGGCTCCTGCTCCGGCGCCCGGGCCCGGTGGACCCCACCACCACTTTAACGGTGAAGCCCAGGTCAAAGATTTTATCCAGACGCTGCTCCACTACGGTGGGTACAATGAAATGGCCGACATTCTGGTGAATCTGACATCCTTAGCTTCTGAAATGGGTCGATTAGTGTCGGAGGGTTATGTTCTAACGGTTTTGGCTCCGAACGACGAGGCCATGGCGAAATTGACGACGGACCAGTTGAGCGAACCGGGTGCACCGGAGCAGATTATGTATTACCATCTCATACCCGAGTATCAAACCGAAGAGAGCATGTACAATGCGGTTCGACGGTTCGGTAAGGTCCGGTACGATACTCTACGGTTACCGCATAAGGTGGTGGCTCAGGAGGCAGACGGGTCGGTCAAATTCGGGCAGGGAGACGGGTCAGCTTATTTGTTCGACCCGGATATATATACGGACGGTCGGATCTCGGTGCAGGGCATCGATGGGGTTTTGTTCCCGGCCGAGAAGGAGACAAAACCGGTGAGCCGGCCGGTTCAAGCGGCCAAGGTCGCGGTCAAGCAGAGACGAGGAAAATTGCTGGAAGCAGCGTGCTGGATGCTTGGAACCTTTGGACAAGATACTAGATTCACCACGTGCCATTGA 1401 0.5625 MDRRIYGATHLRIFCSYLLLLFGFAFSDSPNTRLSVASSSSSSSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGSRNITIFAPRNEALERDLDPEFKRFLLEPRNLKSLQSLLMFHVIPTRIRSETLPAQSGSTRHETLFNSEFLHFASNGTGEWTVDRARIIHPDVVTRPDGVIHGIERLLVPRSVQDDFNRRRSLRSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSPPALPIYDAMAPGPALAPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLASEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPAEKETKPVSRPVQAAKVAVKQRRGKLLEAACWMLGTFGQDTRFTTCH 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3450 466 SUPERFAMILY FAS1 domain 253 420 IPR036378 -
Bisa02g3450 466 ProSiteProfiles FAS1/BIgH3 domain profile. 274 402 IPR000782 -
Bisa02g3450 466 FunFam Fasciclin-like arabinogalactan protein 16 269 420 - -
Bisa02g3450 466 Gene3D FAS1 domain 52 193 IPR036378 -
Bisa02g3450 466 MobiDBLite consensus disorder prediction 212 263 - -
Bisa02g3450 466 ProSiteProfiles FAS1/BIgH3 domain profile. 48 190 IPR000782 -
Bisa02g3450 466 Gene3D FAS1 domain 293 420 IPR036378 -
Bisa02g3450 466 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 14 463 IPR044654 -
Bisa02g3450 466 SMART fasc_3 87 193 IPR000782 -
Bisa02g3450 466 SMART fasc_3 315 420 IPR000782 -
Bisa02g3450 466 SUPERFAMILY FAS1 domain 52 193 IPR036378 -
Bisa02g3450 466 MobiDBLite consensus disorder prediction 231 245 - -
Bisa02g3450 466 Pfam Fasciclin domain 299 419 IPR000782 -
Bisa02g3450 466 Pfam Fasciclin domain 60 192 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3450 Bisa-ChrBisa02 85691032 85693409 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1022 12 16430776 16434218 Bisa02g3450 02 85691032 85693409 CCT