Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0709 ATGTGGGGCGGTGGAACACCGGCTGATTCGTTCTACCTAGTCCGCCCCGAGTGTGCCGACGATGTTCCCAAATCTCGATTTAGGATCAAGGCTGGTAAAACACTAAGTGCAAGAAAATGGCATGCCGCATTTGATGCAGAAGGCCATCTGGATATAGGCAGGACTCTAAGCCGAATCTACCGTGGGGGGATCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTCTGCTTGGCTGCTATGATCCAATGAGTACATTTGATGAAAGAGAGCAGATTAATCAGCGCCGAAGGGCACAATATGCTAAATGGAAGGAAGACTGCCGCCAATTGTTTCCACTTGTTGGAAGTGGTAAATTTATTACAGCACCTGTAATCTCTGGAGATGGCCAGCCGATTCATGATCCACTGGTGCTGTTAGAAACAAATCCACACAATGGAGTTGTTATACCTGTTCAAGATGGCATAAATTCTTCAAGTACAGGCAGTGCAAATAATTTAGAAAAGGTGACAGACAAGAGAGTCATCCAGTGGATGTTAACTCTTCATCAAATAGGTCTTGATGTTGTTCGCACGGATAGGACACTGGTTTTTTATGAGAAGCAAGAGAACTTGTCGAAACTATGGGATATTCTTGCTGTTTATGCTTGGATAGATACAGACGTGGGTTATTGTCAAGGAATGAGTGATCTCTGCTCCCCTATGATAATTCTTCTCAACAATGAAGCTGATGCATTTTGGTGTTTTGAGCGTCTGATGCGGAGATTGCGAGGAAATTTCAGATGCACTGATAATTCAGTTGGGGTGGAGGCTCAATTAAGTAATTTGGCTTCAGTTACTCAAGTCATCGATCCCAAACTTCATCAACATCTAGAGACTCTTGGTGGAGGTGACTATCTGTTCGCATTTCGGATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTTTGTGATTCATTGTACCTTTGGGAGATGATGTGGGCTCTGGAATATGATCCTGACTTGTTCTTAATGTATGAAGAGCCCGAATCAGTGTCTGAAAAAGCTGAGGGATCCAGTAAAGGAAGAATAAAAACGAAGTCAATACGTCAATGTGGGAAGTATGAGAGAGAAAATAAGAAAAATGCAGCAAAGACTGCAAATGATCCTCTTCCCATTTCTGTTTTCCTTGTTGCGAGTGTGTTGAAAGATAAGAGCTCAAAACTGAAGCAGGAAGCGCGTGGCCTGGATGATGTTGTCAAGATATTGAATGACATGACTGGAAATTTAGATGCCAGAAAAGCTTGCACTGGGGCAATGAAACTTCAAAAAAAGTATTTGAAAAAGGCCAACGCTAATAAGACATAG 1344 0.4256 MWGGGTPADSFYLVRPECADDVPKSRFRIKAGKTLSARKWHAAFDAEGHLDIGRTLSRIYRGGIHPSIRGEVWEFLLGCYDPMSTFDEREQINQRRRAQYAKWKEDCRQLFPLVGSGKFITAPVISGDGQPIHDPLVLLETNPHNGVVIPVQDGINSSSTGSANNLEKVTDKRVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDTDVGYCQGMSDLCSPMIILLNNEADAFWCFERLMRRLRGNFRCTDNSVGVEAQLSNLASVTQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEEPESVSEKAEGSSKGRIKTKSIRQCGKYERENKKNAAKTANDPLPISVFLVASVLKDKSSKLKQEARGLDDVVKILNDMTGNLDARKACTGAMKLQKKYLKKANANKT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0709 447 SMART tbc_4 60 352 IPR000195 -
Bisa12g0709 447 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 40 289 IPR035969 -
Bisa12g0709 447 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 267 438 IPR035969 -
Bisa12g0709 447 Gene3D - 265 446 - -
Bisa12g0709 447 Pfam Rab-GTPase-TBC domain 164 327 IPR000195 -
Bisa12g0709 447 FunFam TBC1 domain family member 15-like 161 259 - -
Bisa12g0709 447 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 157 259 - -
Bisa12g0709 447 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 34 416 - -
Bisa12g0709 447 ProSiteProfiles TBC/rab GAP domain profile. 63 329 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0709 Bisa-ChrBisa12 11336020 11347439 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0709 12 11336020 11347439 Bisa02g3101 02 78794585 78799836 CCT
Bisa12g0709 12 11336020 11347439 Bisa12g0709 12 11336020 11347439 ECH