Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3101 ATGTGGAGAGATAATGGACTTCCTGCTGATTCTTTCTACGAAGTTCGGCCGGAGTGTAGCGATGATGTCCCAAAGACTCGATTTAAGATCAAGGCAGGTAAAACACTAAGTGTAAGAAAATGGCAGGCTGCATTTACTCCAGAAGGTTATCTGGATATAAGCAAGACTCTGGGCCGAATTCAACGTGGGGGAATCCATCCAACAATTAGAGGAGAAGTTTGGGAATTTCTACTTGGTTGCTATGATCCAAATAGTTCTACTGAGGAAAGAGAGCAGATAAGAAAGCGCCGAAGGGCGCAATATAATACGTGGAAAGAAGTATGCCAAAAATTGTTTCCTCTTGTTGGAAGTGGTAAATTTATTACAGCGCCTGTAATCACTGAAGAAGGTCAACCCATTCTCGATCCATTAGTGCTGTTAGAAACAAATCCAGGCAAAGGTGCTATCGTACCTCCTCAAGATGCTGCAACTAACGGGGTTTCTTCAAGTACAGATGCTGCAAGTCATGCTGCAAGTAATTTAGAAAAGGTGACGGACAAGAGAATAATTCAGTGGATGTTGACACTCCATCAAATAGGTCTTGACGTGCTTCGAACTGATAGGACACTGGTCTTTTATGAGAAGCAAGAGAACTTGTCAAAACTATGGGATATTCTTGCTGTTTATGCTTGGATAGATACAGATGTTGGCTATTGTCAAGGAATGAGTGACCTGTGCTCCCCTATGATAATACTTTTGGAAGATGAAGCTGATGCATTTTGGTGTTTTGAACGTCTCATGCGCAGATTGCGAGGAAATTTCAGATGCACTGATAGCTCTGTTGGTGTCGAAACACAACTGAGTAACTTGGCTTCAATTACTCAAGTCATTGATCCAAAACTTCATCAACATTTGGAGCTTCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGAATGCTCATGGTTTTGTTTCGTCGAGAATTCTCCTTTTGTGACTCACTGTACCTTTGGGAGATGATGTGGGCTCTAGAGTACGATCCGGACTTGTTCATGATGTATGAAGAGCCTGATTCAGATCCTGAGGATCACTCTAAACGAAAAGCAAAGTCAACAAAACAATGTGGGAAGTATGAGAGAGAGAATTTGAAAAATGCAGCAACTAATTCTGAGGCTCCTCTTCCCATATCCGTTTTCCTTGTTGCCAGTGTGTTGAAAGACAAGAGTGATAAACTTCTAACAGAGGCTCGAGGCCTCGATGATGTTGTCAAGATACTGAATGACATTACTGGCAACCTGGATGCCAAGAAGGCTTGCACAGGAGCAATGAAACTGCACAAGAAATATATGAAAAAGGTGCCCAAGAAACCCATTGAACATAGTCCGTGA 1365 0.422 MWRDNGLPADSFYEVRPECSDDVPKTRFKIKAGKTLSVRKWQAAFTPEGYLDISKTLGRIQRGGIHPTIRGEVWEFLLGCYDPNSSTEEREQIRKRRRAQYNTWKEVCQKLFPLVGSGKFITAPVITEEGQPILDPLVLLETNPGKGAIVPPQDAATNGVSSSTDAASHAASNLEKVTDKRIIQWMLTLHQIGLDVLRTDRTLVFYEKQENLSKLWDILAVYAWIDTDVGYCQGMSDLCSPMIILLEDEADAFWCFERLMRRLRGNFRCTDSSVGVETQLSNLASITQVIDPKLHQHLELLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFMMYEEPDSDPEDHSKRKAKSTKQCGKYERENLKNAATNSEAPLPISVFLVASVLKDKSDKLLTEARGLDDVVKILNDITGNLDAKKACTGAMKLHKKYMKKVPKKPIEHSP 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3101 454 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 39 419 - -
Bisa02g3101 454 SMART tbc_4 61 360 IPR000195 -
Bisa02g3101 454 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 275 441 IPR035969 -
Bisa02g3101 454 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 165 267 - -
Bisa02g3101 454 ProSiteProfiles TBC/rab GAP domain profile. 64 337 IPR000195 -
Bisa02g3101 454 Gene3D - 273 450 - -
Bisa02g3101 454 FunFam TBC1 domain family member 15-like 169 267 - -
Bisa02g3101 454 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 39 297 IPR035969 -
Bisa02g3101 454 Pfam Rab-GTPase-TBC domain 176 335 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3101 Bisa-ChrBisa02 78794585 78799836 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0709 12 11336020 11347439 Bisa02g3101 02 78794585 78799836 CCT