Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2456 ATGGTGGATATCACAGCTTCCATAACAGGGTTACGAGGTCTGGAAGTTGGTAATTGTTATTACTTAGATAGAAAGCTCAAAGAAAGAAGTGAGTCTTACGCTGGCCCTGGGTTATTGTTCATCCATATGATCATCAAAATGAAGAAAGGGTATGGTGGAGTTCTGATTGCCTCCTTGTTTACGTTGTTTATGCTTCTGATCCTAAGATATGGGGTCATGAAAAACCCTATCGGTGAAGGTTATCTTACTATGCCTGGCCCTTTCAATGGGACCAATCCTCTCAAATGGATAAATCCTGGGGTTACACCTGCTGTTCAAAATCCAGAGAGTGCTTCTAAAGTGATTTCTGCTGATGCTGTAGTATCTAGCCTCTTTGCTGGGAGTAACTTATCCAATGAAGAGCAACAATCTTTGCAGACATGGGACCAATTAAGACACTTGATTGATCATGCTCAGGGTTTACCTAATGCAGCAGAAGCTATCAAGGAGGCAGTAGGTGCTTGGAATAGTCTCACGCACTCAGTTAAAGGTTATGCAAATGACAGTTCAAATGAGAGAATGAAAGAGAAACAATGTCCCTATTTTCTTAATAACATGAATTCAACAGAATTTGGTAACAGTAGTTACAAATTGCAATTTCCTTGTGGCCTGACTCAAGGTTCTTCCATCACTGTCATTGGCATTCCCGATGGTCTTCTTGGTAATTTTCGGATTGACTTGACAGGAGATCCGCTTCCTGGGGAACCTGATCCTCCTATTATTTTGCACTATAATGTTAGGCTTCATGGTGATAAAATCACTGAAGATCCTGTAATTGTCCAAAATACCTGGACGATGGCTCATGATTGGGGTGAAGAGGAGCGTTGTCCATCTCCTACTCCTGAAAAGGTCAAGAAAGTTGATGACTTGTGGCAGTGTAATAAGATCCTAGGCAAGAACATTAGCCAACTTTCCATGGCTGGCATGTATTCACACAATCCAAGGCAATTGACAGCATCAGAAGGACATTCTAAAAATAGAAAATACTTTCCTTTTAAGCAAGGTTTACCATTTGTTGCAACTATTCGAGTGGGATCAGAAGGAATCCAGATGACTGTCGATGGAAAGCACATAACGTCGTTTGCTTTCCGTGAAACCTTGGAGCCATGGCTTGTAAGTGAGATAAGAATATCTGGGGACATCAAGTTGATTTCTGTTCTTGCCAGTGGTTTGCCAACTTCAGAAGATGCAGAACATATTATTGATCTTGAGTCATTGAAATCAAGTCCTCTATCTGTAGGGACCCTATTGGATCTCTTAATTGGTGTCTTCTCTACGACTAACAATTTTAAGCGTAGGATGGCTGTTAGAAGAACCTGGCAACAGTATGATGCAGTTCGATTGAATACAACTGCCGTGCGCTTCTTTGTTGGCTTGCACAAAAACCAAATAGTTAATGAAGAACTATGGAAAGAAGCAAAGACCTATGGAGACATACAGTTGATGCCATTTGTTGACTATTACAGCCTCATCACTTGGAAAACCTTAGCAATCTGTATATTTGGGACGGAGGTTGTTTCTGCAAAGTACATCATGAAGACGGATGATGATGCATTTGTTCGCGTGGACGAAGTGCTAGCTACTTTGAATAGGATCAATAGGACTCATGGGTTGCTTTATGGACTCATAAATTCAGATTCCCGACCTCACCGTAGTTCCGATAGCAAATGGTACATCAGCCCTGAGGAATGGCAGGAAGCAACTTATCCCCCTTGGGCACATGGTCCTGGCTATGTGGTCTCACATGACATAGCAAAGTCGGTGTACAGGAGATACAGAGACGGTCGTTTGAAGATGTTCAAATTAGAGGATGTGGCAATGGGAATTTGGATCGCAGACATGAAGAAGGAAGAAGGCCTAGATGTTCATTACGAGAATGAAGCAAAAGTCTATAACGAGGGCTGCAAGGATAATTATGTGGTTGCTCATTACCAGGGTCCAAGCGAGATGCTCTGTTTATGGCAGAAAATTCAGGAAGGAAAAGGTGCAAAATGCTGTGGTAATAGAAGATGA 2052 0.4191 MVDITASITGLRGLEVGNCYYLDRKLKERSESYAGPGLLFIHMIIKMKKGYGGVLIASLFTLFMLLILRYGVMKNPIGEGYLTMPGPFNGTNPLKWINPGVTPAVQNPESASKVISADAVVSSLFAGSNLSNEEQQSLQTWDQLRHLIDHAQGLPNAAEAIKEAVGAWNSLTHSVKGYANDSSNERMKEKQCPYFLNNMNSTEFGNSSYKLQFPCGLTQGSSITVIGIPDGLLGNFRIDLTGDPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTMAHDWGEEERCPSPTPEKVKKVDDLWQCNKILGKNISQLSMAGMYSHNPRQLTASEGHSKNRKYFPFKQGLPFVATIRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIRISGDIKLISVLASGLPTSEDAEHIIDLESLKSSPLSVGTLLDLLIGVFSTTNNFKRRMAVRRTWQQYDAVRLNTTAVRFFVGLHKNQIVNEELWKEAKTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYIMKTDDDAFVRVDEVLATLNRINRTHGLLYGLINSDSRPHRSSDSKWYISPEEWQEATYPPWAHGPGYVVSHDIAKSVYRRYRDGRLKMFKLEDVAMGIWIADMKKEEGLDVHYENEAKVYNEGCKDNYVVAHYQGPSEMLCLWQKIQEGKGAKCCGNRR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2456 683 FunFam Beta-1,3-galactosyltransferase GALT1 423 653 - -
Bisa11g2456 683 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 209 402 IPR001079 GO:0030246
Bisa11g2456 683 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 368 636 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bisa11g2456 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 209 402 IPR013320 -
Bisa11g2456 683 SMART Gal_bind_lectin_2 213 401 IPR001079 GO:0030246
Bisa11g2456 683 Gene3D - 426 672 - -
Bisa11g2456 683 Pfam Galactosyltransferase 444 628 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bisa11g2456 683 SMART galectin_3 209 402 IPR001079 GO:0030246
Bisa11g2456 683 Pfam Galactoside-binding lectin 209 400 IPR001079 GO:0030246
Bisa11g2456 683 CDD GLECT 209 399 IPR001079 GO:0030246
Bisa11g2456 683 SUPERFAMILY Nucleotide-diphospho-sugar transferases 513 649 IPR029044 -
Bisa11g2456 683 Gene3D - 205 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2456 Bisa-ChrBisa11 49243722 49247509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2456 47 679 Glycosyltransferase AT1G26810 61.742 0.0 813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0939 08 17144655 17151023 Bisa11g2456 11 49243722 49247509 CCT
Bisa11g2456 11 49243722 49247509 Bisa11g2456 11 49243722 49247509 ECH