Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0939 ATGGGGGAAAGGCGAACAAAGAAACGGCTATATTTAATTCAAGGTTTACTGAACATGAAGAAGTGGTACGGAGGCTTGTTGATCTTGGCTCTGGGTACAATGTTGATTCTCCTTTACGGCCTGATTGGAATGCAGCCACAGAAACAATCAGTGAAACAATCAGCCTACAGTTTCTTCAATAATCATACACCAAATGACTCCACTGTAAGAAATAACCTTACTATAAACTCTTCTGATGTGAAGGTAAAAAGTATTCCGAAACCAACAAAAAGACCACATTCTATACATATTCAAGGGCTTGATGATCTTTCTGACATGAAAGACTTTTCTGAAGGAGAGTTGAAAGCGATGCTTGTATGGACTCCCTTGTTTTCCCTGCTGTCTAGGTCAGATGCTTTACCTGAAACAGCTCAAGGAGTTAAAGAGGCTTCTGTAGCATGGAGGGAGTTGTTGTCCACGATTGAGAAGGAGAAAGCCTCTAGGATTAGCAGGATAGATAGCCCAGAAAATCAAAATTGCCCATTGACAGTAACCACACTTGGTAAGAGAGTACCAAGCAGTGGAGTCATTCTTGAGCTTCCTTGCGGTCTAGTTGTAGATTCTTCTATTACGCTAATTGGCATTCCTAATGGGCAAAACAGAAGCTTTCAAATTGACCTTGTGGGCCAACAAAAAGATGAGGAGCCAAATCCACCAATCATCTTGCATTACAATGTGAGTCTTCCAGGAGAAAATTTGACAGAGGATCCATTTATAGTTCAAAATACATGGACTAATGACCTTGGATGGGGTAAAGAGGAAAGGTGTCCTGCACATAGTTCTGCTAATATTCGAGAAGTTGATGGACTTGTCCTCTGCAATGTACAAATTGTCAGAAGCAGCAATGAAGAGAATCTAACTGTGGGTCAACCTACCAGTGCTATACCTGCTAATATTTCATGGGAAAGTGCGCATAGAACTGCTAATTTCCCTTTTGCTGAGGGGAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAAGGATTTCATATGACTGTGAATGGAAGGCATGAAACATCTTTTGCATTTGGGGAGAAACTTGAACCATGGTTAGTTAGCGGCATCCAACTAGCAGGTGGTTTACGTCTTTTATCAGTGCTGGCAAAAGGTTTACCTGTTACTGAAGATAATGATATAGTTGTTGATGTTGAGAAACTGAAAGCTCCTGCAATTCCCAGAAAAAGGCTTGTATTGTTAATTGGAGTATTCTCTACTGGGAACAACTTTGAGCGTCGAATGGCCGTCAGGAGGTCTTGGATGCAATATGAGGCCGTGCGCTCTGGGAAAGTAGCTGTCCGATTTTTCATTGGGCTTCACAAAAACAATATAGTTAATTTTGAGCTGTGGAGAGAAGCTCAGGCATATGGAGATATCCAGTTTCTGCCTTTTGTTGATTATTATGGTTTGATCACCTTCAAAACAATTGCAACATGCATTCTGGGGACAAAAATCATCCCTTCTAAATACATAATGAAAACGGATGATGATGCTTTTGTTAGGATTGATGAAGTGCTTTCTAGCCTTAAAGGAAAGCCATCAGATGGTCTCCTGTATGGTCTCATATCTTTCAAATCATCGCCTCACAGGGATAAAGACAGCAAATGGTACATCAGTGAGGAGCAATGGCCACATGCTTCATACCCACCGTGGGCACATGGTCCAGGTTATGTAATCTCTCGAGACATAGCAAAATTCATTGTCCATGGCCATGAGGAAGGAAAACTCAAGCTCTTCAAATTAGAAGATGTTGCCATGGGAATATGGATTGAAGAGTTCAGGAATAGTGGTAAAGAAGTACATTACGAAAATGATGAGAGGTTTTACAATGCTGGATGTGAGTCAAATTATATACTTGCCCATTATCAGAATCCAAGGATGGTGTTATGCCTATGGGAGAAGCTGCAGAAAGAACACCAGCCAGCATGCTGCGAGTAG 1974 0.4144 MGERRTKKRLYLIQGLLNMKKWYGGLLILALGTMLILLYGLIGMQPQKQSVKQSAYSFFNNHTPNDSTVRNNLTINSSDVKVKSIPKPTKRPHSIHIQGLDDLSDMKDFSEGELKAMLVWTPLFSLLSRSDALPETAQGVKEASVAWRELLSTIEKEKASRISRIDSPENQNCPLTVTTLGKRVPSSGVILELPCGLVVDSSITLIGIPNGQNRSFQIDLVGQQKDEEPNPPIILHYNVSLPGENLTEDPFIVQNTWTNDLGWGKEERCPAHSSANIREVDGLVLCNVQIVRSSNEENLTVGQPTSAIPANISWESAHRTANFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAFGEKLEPWLVSGIQLAGGLRLLSVLAKGLPVTEDNDIVVDVEKLKAPAIPRKRLVLLIGVFSTGNNFERRMAVRRSWMQYEAVRSGKVAVRFFIGLHKNNIVNFELWREAQAYGDIQFLPFVDYYGLITFKTIATCILGTKIIPSKYIMKTDDDAFVRIDEVLSSLKGKPSDGLLYGLISFKSSPHRDKDSKWYISEEQWPHASYPPWAHGPGYVISRDIAKFIVHGHEEGKLKLFKLEDVAMGIWIEEFRNSGKEVHYENDERFYNAGCESNYILAHYQNPRMVLCLWEKLQKEHQPACCE 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0939 657 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 189 382 IPR001079 GO:0030246
Bisa08g0939 657 CDD GLECT 188 379 IPR001079 GO:0030246
Bisa08g0939 657 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 398 609 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bisa08g0939 657 Pfam Galactoside-binding lectin 189 380 IPR001079 GO:0030246
Bisa08g0939 657 SMART Gal_bind_lectin_2 193 381 IPR001079 GO:0030246
Bisa08g0939 657 Gene3D - 406 652 - -
Bisa08g0939 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 191 382 IPR013320 -
Bisa08g0939 657 FunFam Beta-1,3-galactosyltransferase GALT1 403 630 - -
Bisa08g0939 657 Pfam Galactosyltransferase 423 605 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bisa08g0939 657 Gene3D - 183 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0939 Bisa-ChrBisa08 17144655 17151023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0939 17 657 Glycosyltransferase AT3G06440 51.863 0.0 634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0939 08 17144655 17151023 Bisa11g2456 11 49243722 49247509 CCT
Bisa08g0939 08 17144655 17151023 Bisa08g0939 08 17144655 17151023 ECH