Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1244 ATGGCCGTTCAAGCTCAATACCCATCCAATGTCCTCCTTCTAAACAGAAACGGGCAGGAAGGACATGACTATTCTTTACAACCACAACCAGGAGGAGGAGGAGGAGGACTCCTTGATCAGTCCCATATCTTATTCAACAATGGAGCAGGGACTAATTCTCGCAAGAGAGGAAGAGAAGCTACACCGGTCACTGGCATCGCCCAAACAGCCCCTAATGTTGTTAATCCCTTCTCTCTGCAATCCCAGCCTCCTCAGCTCATAGAACTCTCTCAGCTCCATAACCAGCAACCAAATGTCGTCTCCACAGGCCTCCGATTATCCTTCGGCGACCACCAGCAAAATCACCATCACCATCACCATCATCAACAACAACAGAGACTACAATTACAGCAGCAACGCCAACAACAACAACAACAACAAGCGACTCAGCCCTACGCTTTCTTATCGCTATTATCTGAAGGATTCGCCTCCCAAATCAAACAACAGCGCGATGAAATTGACCAATTCCTGCAAGTCCAGGGAGAGCAATTGCGACAAGCATTAGCAGAGAAAAGACAAAGACACTACCGTGCACTTCTAACCGCGGCGGAAGAAACCATCGCCCGGCGGTTGAGAGAGAAGGAGGCGGAGGTTGAGAAAGCCGCGCGCAGGAGCGCCGAGTTAGAGGCACGCGCGGCGCAACTTAGCGTGGAGGCGCAGGTTTGGCAGGCGAAGGCGAAGGCGCAGGAGGCAACCGCCGCTTCCCTGCAGGCGCAACTGCAGCAGGCCATCATGAGTGGGGGTGCGCTGGAAAAGGGAGGAGGCTGCTTTGCGGAGGACGGAGGGCTATCGTGCGCCGGGGGCGGAGAGGGCCACGCGGAGGACGCCGAGTCAGCATATATTGACCCGGACCGAGTCGTGGCGTCGGGACCGAAGTGCAGAGGGTGCGGGAAGCGAGTGGCATCGGTGGTGGTATTGCCCTGTCGGCACCTATGCTTCTGCACGGAATGCGACGCGCATTTCCGCGCGTGTCCCGTGTGCCTCACCATCAAAAATTCAACCGTTGAAGTCCTTCTCTCTTAG 1062 0.5537 MAVQAQYPSNVLLLNRNGQEGHDYSLQPQPGGGGGGLLDQSHILFNNGAGTNSRKRGREATPVTGIAQTAPNVVNPFSLQSQPPQLIELSQLHNQQPNVVSTGLRLSFGDHQQNHHHHHHHQQQQRLQLQQQRQQQQQQQATQPYAFLSLLSEGFASQIKQQRDEIDQFLQVQGEQLRQALAEKRQRHYRALLTAAEETIARRLREKEAEVEKAARRSAELEARAAQLSVEAQVWQAKAKAQEATAASLQAQLQQAIMSGGALEKGGGCFAEDGGLSCAGGGEGHAEDAESAYIDPDRVVASGPKCRGCGKRVASVVVLPCRHLCFCTECDAHFRACPVCLTIKNSTVEVLLS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1244 353 Coils Coil 119 140 - -
Bisa11g1244 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 353 IPR013083 -
Bisa11g1244 353 MobiDBLite consensus disorder prediction 20 60 - -
Bisa11g1244 353 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 288 352 - -
Bisa11g1244 353 MobiDBLite consensus disorder prediction 110 141 - -
Bisa11g1244 353 ProSiteProfiles Zinc finger RING-type profile. 306 340 IPR001841 -
Bisa11g1244 353 MobiDBLite consensus disorder prediction 125 141 - -
Bisa11g1244 353 Coils Coil 197 252 - -
Bisa11g1244 353 CDD mRING-HC-C3HC5_CGRF1-like 304 340 - -
Bisa11g1244 353 PIRSF SBP1_RNase_bind 113 353 IPR017066 -
Bisa11g1244 353 PIRSF SBP1_RNase_bind 1 125 IPR017066 -
Bisa11g1244 353 MobiDBLite consensus disorder prediction 44 58 - -
Bisa11g1244 353 Pfam Zinc finger, C3HC4 type (RING finger) 305 341 - -
Bisa11g1244 353 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 47 350 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1244 Bisa-ChrBisa11 31152171 31153559 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1244 11 31152171 31153559 Bisa01g1020 01 17270120 17271466 CCT
Bisa11g1244 11 31152171 31153559 Bisa11g1244 11 31152171 31153559 ECH