Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1020 ATGGCCGTTCAAGCTCAATACCCAACCAATGTCCTCCTTCTCAACAACAGAAACGGACAAGAGGCTTATGACTACTCATTACAACCCCAACCGGGAGGAGCGGGAGGAGCAGGAGCAGGGCTTCTTGATCAGTCCCATATGCTATTCAACAATGGAGGAGGTACTAATTGCCGCAAGAGAGGAAGAGAAACCACCGCAGCGACGGGGATTGCGCCGGCAGCTCCTAATGTTATAAATTCGTTCTCTATGCAATCGCAGGCTCCTCAGCTCATAGACCTCTCTCAACTCCATAACCACCAACAAAATGGGGTCTCCACTGGCCTCCGCTTATCCACCTTCGCCGACCACCACCATCAACATCAAAGACTTCAATTACATCACCGACATCAACAACAAGAAGATGGGTGTCACTCCTCAGCTTTCTTGTCTCTGTTTCCTGAGGGTATCGCCTCCCAAATCAAACAACAGAGAGACGAAATTGACCAATTCCTTCAAGCCCAGGAAGCGCAATTGCGCCGGACATTAGCGGAGAAGAGGCAGAGACATTACCGGGCGCTACTGAGCGCGGCGGAAGAAACGGTGGCGCGGCAGTTGAGGGAGAAGGAAGTGGAGGTGGAAAAGGCGACGCGCAGGAACGCGGAGTTGGAGGCACGGGCGGCGCAACTTAGCGTGGAAGCGCAGGTTTGGCAGGCGAAGGCAAAAGCAGAGGAAGCGACAGCCGCTTCTCTACAAGCGCAGCTGCAGCAGGCAATGATCGCAGAGAAGAGAGAAGAGGGAGGGGTATCGTACGGAGAGGGGCAAGCGGAGGACGCCGAGTCGGCGTACGTTGACCCGGACCGGGTGGAAGCGGGTGGACCGAAATGCAGAGGCTGTGGGAAGCGAGAGGCCTCCGTGGTGGTGTTGCCGTGTCGGCATCTGTGCATGTGTACCAAATGCGACGCGCACTTCAGAGCGTGTCCCGTTTGCCTCAACCTCAAAAATTCTACCGTTGAGGTCTTTCTGTCTTGA 1008 0.5506 MAVQAQYPTNVLLLNNRNGQEAYDYSLQPQPGGAGGAGAGLLDQSHMLFNNGGGTNCRKRGRETTAATGIAPAAPNVINSFSMQSQAPQLIDLSQLHNHQQNGVSTGLRLSTFADHHHQHQRLQLHHRHQQQEDGCHSSAFLSLFPEGIASQIKQQRDEIDQFLQAQEAQLRRTLAEKRQRHYRALLSAAEETVARQLREKEVEVEKATRRNAELEARAAQLSVEAQVWQAKAKAEEATAASLQAQLQQAMIAEKREEGGVSYGEGQAEDAESAYVDPDRVEAGGPKCRGCGKREASVVVLPCRHLCMCTKCDAHFRACPVCLNLKNSTVEVFLS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1020 335 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 52 332 IPR017066 -
Bisa01g1020 335 CDD mRING-HC-C3HC5_CGRF1-like 286 322 - -
Bisa01g1020 335 Pfam Zinc finger, C3HC4 type (RING finger) 287 322 - -
Bisa01g1020 335 PIRSF SBP1_RNase_bind 1 335 IPR017066 -
Bisa01g1020 335 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 270 334 - -
Bisa01g1020 335 Coils Coil 191 253 - -
Bisa01g1020 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 335 IPR013083 -
Bisa01g1020 335 ProSiteProfiles Zinc finger RING-type profile. 288 322 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1020 Bisa-ChrBisa01 17270120 17271466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1020 288 322 Miscellaneous Gene Families AT2G21380 37.143 5.75e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1244 11 31152171 31153559 Bisa01g1020 01 17270120 17271466 CCT
Bisa01g1020 01 17270120 17271466 Bisa01g1020 01 17270120 17271466 ECH