Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1688 ATGGGATTTTTCAGGTGGGTCAGTGCGATTGTTATCTTCCATTTCTGTGCTGCAATACCCATCTCCTCGGACTACTCCTCGAGCTCAAACGAGATCTCGTCGATCCCCACCAAGTTTTTAAATTATGCCAAGAGGTCCGAAATTTTTGATTGGATGGTTGGAATCAGAAGGAAGATCCACGAGAATCCAGAATTGGGGTATGAGGAATTTAAGACCAGTGAGCTGATAAGAGCAGAATTGGATAAATTGGGCGTCTCTTATAAACATCCAGTTTCAGTCACCGGTGTAATTGGCTATATTGGGACCGGACAGCCACTTGTCGCACTAAGAGCTGATATGGATGCTCTTCCCATGGAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGGTTGTGGTCATGATGCCCATGTTACCATGCTTCTCGGTGCTGCAAGAATCCTCAAAGAGCATGAAAAGGAAATACAGGGAACTGTTGTCCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGAGTAAGAAAATTGTAGAATCTCAAGTCTTAGAAAATGTCAAGGCTATCTTTGGATTGCATGTTGCAACCAACACACCTGTAGCTATTCCCCAGCATTCTATAGACCCCATATTGGCAGCTTCTAATGTGATTGTTAGCCTACAGCACCTTATTTCTCGTGAGGCCGATCCTTTGGACTCCCAGGTTGTGACAGTAGCAAAATTCCAAGGAGGTGGTGCTTTCAACGTTATTCCAGATTCCGTGACAATTGGTGGCACCTTGCGAGCTTTTTTACAAGAAAGTTTCAAGCAACTAAGGGAGCGGATCGAGCAGGTCATCACTGGGCAAGCTGCTGTGCAGAGGTGTAATGCAACTGTTAACTTTTTCGATGGAGAGAAATCCTCCTTACCTCCAACTATTAACGATGCTGACTTGCACGAGCATTTTCGACGAGTGGCAGGGGATATGCTTGGGATAAAAAAAGTCAATGACGTGCCACCAGTGATGGGATCCGAGGACTTTTCATTCTATCAAGAGGCTTTACCCGGTTACTTCTTCTTTCTTGGAATGGAGGACGCTTCTTCACCCGAACGACTCCCGTCGATACACTCGCCTTATTTCAGAGTCAATGAAGATGTACTTCCTTATGGAGCTGCACTTCATGCATCATTAGCCACTACTTATCTTCTCAAATTTCAGCTGGATGCACAGGCTGTAGGAGCGAAACATCATGATGAATTGTAA 1254 0.453 MGFFRWVSAIVIFHFCAAIPISSDYSSSSNEISSIPTKFLNYAKRSEIFDWMVGIRRKIHENPELGYEEFKTSELIRAELDKLGVSYKHPVSVTGVIGYIGTGQPLVALRADMDALPMEEMVEWEHKSKVPGKMHGCGHDAHVTMLLGAARILKEHEKEIQGTVVLVFQPAEEGGGGSKKIVESQVLENVKAIFGLHVATNTPVAIPQHSIDPILAASNVIVSLQHLISREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTLRAFLQESFKQLRERIEQVITGQAAVQRCNATVNFFDGEKSSLPPTINDADLHEHFRRVAGDMLGIKKVNDVPPVMGSEDFSFYQEALPGYFFFLGMEDASSPERLPSIHSPYFRVNEDVLPYGAALHASLATTYLLKFQLDAQAVGAKHHDEL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1688 417 Gene3D - 205 306 - -
Bisa10g1688 417 PIRSF Amidohydrol_AmhX 38 206 IPR017439 GO:0016787
Bisa10g1688 417 PIRSF Amidohydrol_AmhX 201 403 IPR017439 GO:0016787
Bisa10g1688 417 Gene3D Zn peptidases 307 384 - -
Bisa10g1688 417 PANTHER PEPTIDASE M20 FAMILY MEMBER 30 204 IPR017439 GO:0016787
Bisa10g1688 417 CDD M20_IAA_Hyd 52 399 IPR044757 GO:0009850|GO:0016787
Bisa10g1688 417 SUPERFAMILY Bacterial exopeptidase dimerisation domain 205 299 IPR036264 -
Bisa10g1688 417 FunFam N-acetyldiaminopimelate deacetylase 193 305 - -
Bisa10g1688 417 SUPERFAMILY Zn-dependent exopeptidases 46 400 - -
Bisa10g1688 417 Gene3D Zn peptidases 52 204 - -
Bisa10g1688 417 Pfam Peptidase dimerisation domain 207 285 IPR011650 -
Bisa10g1688 417 NCBIfam amidohydrolase 52 204 IPR017439 GO:0016787
Bisa10g1688 417 Pfam Peptidase family M20/M25/M40 108 395 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1688 Bisa-ChrBisa10 45959907 45964186 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1688 10 45959907 45964186 Bisa06g1771 06 59268920 59273338 CCT
Bisa10g1688 10 45959907 45964186 Bisa10g1688 10 45959907 45964186 ECH