Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1771 ATGGGTTTCTTCAAGTGGGCCGATTTGATGGTGGTGTTTCATCTCTTTGCAGCAACACCCATCTTCTCAGTTTCCCCAAACGAACTATCATCGGCAATCCCTGTCGAGTTTTTGAAATATGCCACGAAGCCTGAGGTTTTGGATTGGATGAACGAGATTAGGAGAAAGATTCATGAGAACCCTGAGCTGGGGTATGAGGAATTTGAGACCAGTGAGCTGATACGAGCAAAACTGGACAAATTGGGCGTCCCTTATAAATACCCAGTTGCAGTCACCGGCGTTATTGGCTTCATAGGTACCGGACGGCCTCCTTTTGTTGCAATAAGAGCTGATATGGATGCTCTTGCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCTTGTGGACATGATGCTCATGTTGCTATGCTTCTCGGTGCTGCAAAGATCCTCAAAGACCATGAAAAAGAGATAAAAGGAACTGTAGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGCGGGGCCAAAAATATTTTAGATACTGGAGCCTTAGAAAATGTCACCGCTATCTTTGGCTTGCATGTCAACCCTAACTTACCTTTAGGTGTAGTGGCCTCTAGGTCTGGCCCTTTATTGGCAGGAAGTGGCTTCTTTGAAGCAGTGATTAGTGGGAAGGGAGGTCATGCAGCCATTCCGCAACATGCAATAGATCCCATATTGGCAGCTTCCAATGTGATTGTTAGCTTACAACATCTTGTTTCTCGCGAGGCTGATCCTCTCGACTCCCAGGTTGTAACAGTAGCAAAATTTCAAGGAGGTGGTGCCTTCAACGTTATTCCAGATTCTGTCACAATTGGTGGCACCTTCCGAGCTTTTTCAAAAGAAAGTTTCATGCAGCTAAGACAGCGTATTGAGCAGGTTATTGCTGGACAAGCTGCTGTGCAGAGGTGCAGTGCAACAATTAGCTTCCTTGAGAAAGAGAAACCCTTCTTCCCTGCAACTGTAAATGACGGTGACTTGCACGATCATTTTCGACAAGTAGCTGGGGATTTGCTCGGTATCAATAATGTTAGAGACATGCAACCATTGATGGGATCTGAGGACTTTGCATTCTATCAAGAGGCTATACCTGGCTACTTCTTTCTTCTTGGAATGGAGAATGCCTCAGTTGAAAAGCTTGCGTCAGTACACTCACCCCATTTCAAAATCAATGAAGATGTTCTTCCTTATGGAGCTGCACTTCATGCATCACTAGCTGCTAGTTATCTCCTCAAGTTTCAGCAGAATGTGCCAGAGCAAGGTAAATATCATGATGAATTGTAA 1329 0.4507 MGFFKWADLMVVFHLFAATPIFSVSPNELSSAIPVEFLKYATKPEVLDWMNEIRRKIHENPELGYEEFETSELIRAKLDKLGVPYKYPVAVTGVIGFIGTGRPPFVAIRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKDHEKEIKGTVVLVFQPAEEGGGGAKNILDTGALENVTAIFGLHVNPNLPLGVVASRSGPLLAGSGFFEAVISGKGGHAAIPQHAIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLRQRIEQVIAGQAAVQRCSATISFLEKEKPFFPATVNDGDLHDHFRQVAGDLLGINNVRDMQPLMGSEDFAFYQEAIPGYFFLLGMENASVEKLASVHSPHFKINEDVLPYGAALHASLAASYLLKFQQNVPEQGKYHDEL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1771 442 CDD M20_IAA_Hyd 50 413 IPR044757 GO:0009850|GO:0016787
Bisa06g1771 442 Gene3D Zn peptidases 51 410 - -
Bisa06g1771 442 Pfam Peptidase family M20/M25/M40 107 421 IPR002933 GO:0016787
Bisa06g1771 442 NCBIfam amidohydrolase 51 412 IPR017439 GO:0016787
Bisa06g1771 442 PANTHER PEPTIDASE M20 FAMILY MEMBER 29 432 IPR017439 GO:0016787
Bisa06g1771 442 SUPERFAMILY Bacterial exopeptidase dimerisation domain 215 334 IPR036264 -
Bisa06g1771 442 FunFam N-acetyldiaminopimelate deacetylase 215 333 - -
Bisa06g1771 442 PIRSF Amidohydrol_AmhX 37 429 IPR017439 GO:0016787
Bisa06g1771 442 SUPERFAMILY Zn-dependent exopeptidases 45 426 - -
Bisa06g1771 442 Gene3D - 215 333 - -
Bisa06g1771 442 Pfam Peptidase dimerisation domain 216 313 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1771 Bisa-ChrBisa06 59268920 59273338 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1688 10 45959907 45964186 Bisa06g1771 06 59268920 59273338 CCT