Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g1654 ATGTCCGAAAAAGATGAGGCCTGTTCTACTCAGCTTGTCGATGGAGATGGAACATTCAATGTTGCTGGCCTGGAAAATTTTATGAAGGAGATGAAATTGGGGGAATGCGGGCTTTCATATGCTGTAGTTTCTATTATGGGTCCACAAAGTAGTGGCAAGAGTACGCTATTAAATAAATTGTTTGCTACCAACTTCAGGGAGATGGATGCTTTTAAAGGAAGGTCTCAAACAACTAAAGGAATTTGGATAGCAAGATGTGCTGGCATAGATCCTTTTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTTTCAGATATAGTGCTAATAAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTGTTGAAAACTGTCTTTCAGGTTATGATGAGACTGTTTAGCCCTCGCAAAACAACATTGTTATTTGTCATACGTGATAAAACAAGAACACCCCTTGAAAATTTAGAACCTGTCTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAGCCACAGGCCCACCAGGAAACTCCATTAAGTGAATTCTTTAATGTCGAAGTCGTTGCTCTTTCCAGTTTTGAAGAAAAGGAAGAGCAATTCAAGGAGCAGGTTGCCAACTTGAGGAGACGATTCTTTCATTCTATTGCTCCTGGTGGGCTTGCAGGGGATCGACGCGGAGTAGTTCCAGCTTCAGGCTTTTCTTTTAGTGCACAGGAAATTTGGAAAGTCATTAAAGAGAACAAGGATCTGGACCTTCCCGCTCATAAGGTCATGGTGGCTACTGTACGATGTGAAGAAATTGCCAATGAGAAGTATGCAGCTTTCACTGTCAATGAGGAGTGGTGTCAGTTGGAAGAGGATGTGCAATCTGGCCCAATTCCTGGATTTGGCAAAAAGCTCAGTTCAATCCTTGGCTCTTGTCTGTCAGAGTATGATGCAGAAGCCACTTATTTTGATGAAGGTGTCAGATCTGCAAAACAAAAGCAGCTTCAAGAAAAATTGTTGCATCTTGTCCAACCGGCATTCCAATCTATGATGGGACACATAAGGTCTGGAATGTTGGATAAGTTCAAGGAAGCACTCGATAAGGCTTTGAAAGGAGGGGAAGGGTTTTCTGCTGCTTCAAAAAAATGCATCAGTTCTTCTATGGCTCAGTTTGATGAAGCATGTAGAGATGTAGTTGTTGAACAAGCAATGTGGGATACATCTAAGGCAAGGGATAAATTCCAGCGTGACATTGATGCACATGTCGCTTCTGTACGTGCAGCTAAGCTGTCTGAACTTACTTCATCATATGAGGAAAAATTGAAGGACGCCTTGGCTGGACCTACTGATGCTCTTCTGGATGGAGCTGATGGTGATACATGGCCAAATATAAGGAATCTTCTTAAGCGTGAGACTGAATCTGCTGTGTCAGGCTTCTCTACTGCACTTTCTGGGTTTGATATGGATGAACAAATGAGGCAGAACATGATTACTAGTTTAGAGGAATACGCAAGGGGTGTAGTTGAAGCAAAGGCTAGGGAAGAATCTGGAAGAGTTCTGATCCGCATGAAGGACAGGTTTACAATGTTGTTTAGCCATGATGCCGATTCAATGCCCCGTACTTGGACAGGAACAGAAGATATTCGTGCGATCACCATGATTGCCCGCACTGCTTCCTTGAAAATACTATCTGTTATGGCTGCTATTCGTTTGGAAGCTGCTGTTGATAATGTCGAGAATATATTAGCTACTGCTTTCTTGGATTCTTCAAGCAGTTCTAGAAAAGATAAGAGCGTCACAGAAGTTGATCCATTGGCTTCAAGCACCTGGAAAGAGATTCCATCCTCTAAAACCCTGATCACACCTGTACAATGCAGATCTGTGTGGCGGCAATTCAAGACAGAGACTGAATACAGTGTCACGCAGGCCATTTCTGCAAAGGAGGCCAACAAGCGAAGTAACAACTGGATGCCTCCTCCCTGGGCAATTGTTGCTTTAGTTATTCTGGGATTTAATGAATTTATGACACTTCTAAGAAACCCCCTCTATTTGGGTGTCATCTTTGTTGGTTATCTCATTACAAAATCCCTATGGGTGCAGCTGGACGTTGCAAATGAATTCAATCATGGAATTTTGCCGGGAATGATATCCCTCTCTGTCAAGTTTCTTCCAACTGTCATGGGCCTCATCAGAAAACTAGCAGAGGAGGGACAGAGTCCTCCAACTAACAATCGTCAGAAACATTCATCTAAAAGCAGTCACAGTGCTGTTACTGCCGGAAATGAAATGAGGTCCAGTGCTTCATCTCAAGCATCTTCCAAGGACAAAGGAACCAAACACTCCAGAACTTCATCTAATGGAACTTCGGCAGACAACGGAGCCAAATACTCCAGTGCTTCATCTGATGGAACATCGTTGGACAAAGAAACCAAATACTCCAGTGCTCCATCTATTGTAACTTCGTCGGAGAAAGAAGCCAAATACTCGAGTGCATCGGAACACCAGTAG 2577 0.4323 MSEKDEACSTQLVDGDGTFNVAGLENFMKEMKLGECGLSYAVVSIMGPQSSGKSTLLNKLFATNFREMDAFKGRSQTTKGIWIARCAGIDPFTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHQETPLSEFFNVEVVALSSFEEKEEQFKEQVANLRRRFFHSIAPGGLAGDRRGVVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFTVNEEWCQLEEDVQSGPIPGFGKKLSSILGSCLSEYDAEATYFDEGVRSAKQKQLQEKLLHLVQPAFQSMMGHIRSGMLDKFKEALDKALKGGEGFSAASKKCISSSMAQFDEACRDVVVEQAMWDTSKARDKFQRDIDAHVASVRAAKLSELTSSYEEKLKDALAGPTDALLDGADGDTWPNIRNLLKRETESAVSGFSTALSGFDMDEQMRQNMITSLEEYARGVVEAKAREESGRVLIRMKDRFTMLFSHDADSMPRTWTGTEDIRAITMIARTASLKILSVMAAIRLEAAVDNVENILATAFLDSSSSSRKDKSVTEVDPLASSTWKEIPSSKTLITPVQCRSVWRQFKTETEYSVTQAISAKEANKRSNNWMPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGYLITKSLWVQLDVANEFNHGILPGMISLSVKFLPTVMGLIRKLAEEGQSPPTNNRQKHSSKSSHSAVTAGNEMRSSASSQASSKDKGTKHSRTSSNGTSADNGAKYSSASSDGTSLDKETKYSSAPSIVTSSEKEAKYSSASEHQ 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g1654 858 Coils Coil 218 238 - -
Bisa10g1654 858 MobiDBLite consensus disorder prediction 760 797 - -
Bisa10g1654 858 Gene3D - 13 273 IPR027417 -
Bisa10g1654 858 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Bisa10g1654 858 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Bisa10g1654 858 MobiDBLite consensus disorder prediction 758 858 - -
Bisa10g1654 858 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Bisa10g1654 858 Pfam Sey1 three-helix bundle domain 323 759 IPR046758 -
Bisa10g1654 858 PANTHER PROTEIN SEY1 5 778 IPR008803 -
Bisa10g1654 858 CDD GBP 36 242 - -
Bisa10g1654 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 249 IPR027417 -
Bisa10g1654 858 Hamap Protein SEY1 [SEY1]. 9 761 IPR008803 -
Bisa10g1654 858 MobiDBLite consensus disorder prediction 805 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g1654 Bisa-ChrBisa10 45365941 45374167 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1654 10 45365941 45374167 Bisa06g1736 06 57999291 58009287 CCT