Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1736 ATGGAAACAAGCGATCATTGTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATGTTGCTGGAATTGAAAGTTTTATGAAGCAGGTGAAACTGGGTGATTGTGGGCTTTCATATGCTGTAGTTTCTATTATGGGGCCACAAAGTAGTGGTAAGAGCACGCTATTAAATCAGTTGTTCAGAACTAACTTCAGGGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACTAAAGGAATTTGGATGGCTCACTGTGCTGGCATAGAGCCTTGTACAATTGTGATGGATTTGGAGGGTACAGATGGACGAGAACGCGGAGAGGATGATACTGCATTTGAAAAGCAGAGCGCTCTATTTGCTCTGGCTGTTTCAGATATAGTGCTTATAAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCCCTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTATTTAGTCCGCGCAAAACAACATTGATGTTTGTCATACGTGATAAAACAAGGACACCCCTTGAGAATTTAGAACCTGTTTTGCGAGAAGACATTCAGAAGATATGGGATTCTGTTCCTAAGCCAGAGGCTCACAAGGAAACCCCGCTAAGTGAATTCTTCAATGTTGAAGTTGTTGCTCTTTCCAGTTTTGAAGAAAAGGAAGAGCAATTTAAGGAGCAGGTTGGCAGCCTAAGGCAACGATTCCATCATTCTATTGCTCCTGGTGGGCTTGCAGGGGATAGACGTGGAGTAGTTCCTGCTTCAGGATTTTCTTTTAGTGCACAGCAAATTTGGAGAGTTATAAAGGAGAACAAAGACCTTGACCTTCCTGCCCATAAGGTCATGGTTGCTACTGTACGCTGTGAAGAAATTGCCAATGAGAAATATGATGCTTTCACTGCAAATGAGGAATGGTGTCAATTGGACGTTGCTGTACAATCTGGCCCGGTTCCTGGATTTGGGAAAAAGCTCAGTTCAATCCTTGACAGTTGTCTGTCAGAGTATGATGCAGAAGCCACTTATTTTGATGAAGGTGTTAGGTCTTCAAAACAAAAGCAACTTCAGGAAAAACTGCTGCAACTTGTCCAACCAGCATTCCAATCTGCTCTGGGACATGTAAGGTCTGGAACTTTTGATAAGTTTAAGGAAGCATTTGACAAGGCTTTGAATGGAGGGGAAGGGTTTTCTGCTGCTGCAGAAAAATGCATTGGGTCTTGTAGGGCCCAGTTTGATGAAGCATGTGCAGATGTTGTTATTGAAAAAGCAAACTGGGATACATCTAAAGTGAAGGAGAAATTGCGGCGTGACATTGATGCGCATGTTGCTTCAGTGCGGGCAGCTAAGCTGTCTGAATTAACTTCATCATATGAGGGAAAGCTGAAGGAGGGCTTGTCCGGACCTGTTGAAGCTCTTTTAGATGGAGCTAACAGTGATACTTGGCCAGCAATTAGAAAACTTTATAGTCGTGAAACTGAATCAGCTGTTTCAGGGTTCTCTTCTGCACTCTCTGCGTATGATATGGATGAAAAAACACATCAGAACATGATTATGAGTTTAGAAAACTACGCAAGGGGTGTGGTAGAAGCAAAGGCTAGGGAAGAAGCTGGAAGGGTTCTAATTCGCATGAAGGACAGGTTTACAACATTATTCAGCCGTGATTCTGATTCAATGCCTCGTATTTGGACGGGGAAGGAAGACATTCGAGCCATCACCAAGACTGCCCGCTCTTCTTCCTTGAAGTTGCTATCTGTTGTCTCTGCAATTCGTTTGGATGATGAAGATGTTGATAATATTGAGAAAACATTAGAAGTTGCATTGCTGGATTCATCAGGGAGCGCTGTGAAGGACAAGAGTATCACGGTGGTTGATCCTCTGGCTTCGAGCACATGGGAAAAGGTTCCATCCTCAAAGACACTGATAACACCTGTACAGTGCAAATCTTTGTGGAGGCAATTTAAGATGGAGACAGAATATAATGTCTCCCAGGCCATAGCTGCACAGGAGGCCAACAAGCGTAATAACAACTGGTTACCTCCTCCATGGGCAATTGTTGCTTTGATTGTTTTGGGATTTAATGAATTTATGACCCTTTTAAGAAATCCATTGTATTTGGGTGTCATCTTTGTTGGTTTTCTTCTTGTAAAAGCCATGTGGGTACAGCTGGATATTCCTGGTGAATTCCGCAATGGAGCTCTGCCGGGACTCATATCCTTGTCGACCAAGTTTCTTCCAACTGTTATGAACCTTATCAGAAAACTAGCAGAGGAGGCACAGAGCCCTGCATCTAACAATCCTCCGAGAAACCCATCAAAAAGCAGTAACAATGATGATCCTGGTCACATCGAAATATCATCGAGTGCTTCGTCTAATGTTACTTCAGACAATGGAATTGAATACTCCAGTCCATCAAAATATGAGTAG 2433 0.4287 METSDHCCSTQLIDGDGTFNVAGIESFMKQVKLGDCGLSYAVVSIMGPQSSGKSTLLNQLFRTNFREMDAFKGRSQTTKGIWMAHCAGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPEAHKETPLSEFFNVEVVALSSFEEKEEQFKEQVGSLRQRFHHSIAPGGLAGDRRGVVPASGFSFSAQQIWRVIKENKDLDLPAHKVMVATVRCEEIANEKYDAFTANEEWCQLDVAVQSGPVPGFGKKLSSILDSCLSEYDAEATYFDEGVRSSKQKQLQEKLLQLVQPAFQSALGHVRSGTFDKFKEAFDKALNGGEGFSAAAEKCIGSCRAQFDEACADVVIEKANWDTSKVKEKLRRDIDAHVASVRAAKLSELTSSYEGKLKEGLSGPVEALLDGANSDTWPAIRKLYSRETESAVSGFSSALSAYDMDEKTHQNMIMSLENYARGVVEAKAREEAGRVLIRMKDRFTTLFSRDSDSMPRIWTGKEDIRAITKTARSSSLKLLSVVSAIRLDDEDVDNIEKTLEVALLDSSGSAVKDKSITVVDPLASSTWEKVPSSKTLITPVQCKSLWRQFKMETEYNVSQAIAAQEANKRNNNWLPPPWAIVALIVLGFNEFMTLLRNPLYLGVIFVGFLLVKAMWVQLDIPGEFRNGALPGLISLSTKFLPTVMNLIRKLAEEAQSPASNNPPRNPSKSSNNDDPGHIEISSSASSNVTSDNGIEYSSPSKYE 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1736 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 249 IPR027417 -
Bisa06g1736 810 Hamap Protein SEY1 [SEY1]. 9 765 IPR008803 -
Bisa06g1736 810 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Bisa06g1736 810 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Bisa06g1736 810 CDD GBP 35 239 - -
Bisa06g1736 810 Gene3D - 14 245 IPR027417 -
Bisa06g1736 810 Coils Coil 218 238 - -
Bisa06g1736 810 PANTHER PROTEIN SEY1 5 796 IPR008803 -
Bisa06g1736 810 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Bisa06g1736 810 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Bisa06g1736 810 MobiDBLite consensus disorder prediction 761 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1736 Bisa-ChrBisa06 57999291 58009287 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1654 10 45365941 45374167 Bisa06g1736 06 57999291 58009287 CCT