Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0143 ATGGAAGCTTCAGCATCCCCGACGACGACGCCCTTCCAAAACGCGCCGTTTCAGGACCTCCCAGAAGCGTCGCCAAAGCCAGCATACAGGAAAAGCTTCGTGACCTCTCTAATGGAGGCCGCCACACTCCGCACTCCGTCCTTCAAAGAAGACACCTACTTCATCTCCCACCTCAAATCCTCCGAGAAGAAAGCCCTACAGGATCTCAAGAACAGATTAGCAGCCTCCAAGGTTTCGGACTCGTCCATGTGGGGGATTCCCCTGCTCGGCGGCGACGACAGAGCCGACGTCATTCTGCTGAAGTTCCTCCGAGCTCGTGACTTCCGAGTGGGAGATTCGCTCAACATGCTTCTCAAGTGCCTGGCTTGGAGGAAGGAGTTCGGAGCAGACGACGTCGTAGAGGAAGACTTGGGTTTCAAGGAGCTCGAGGGGGTGATTGCCTACATGCAGGAGTATGACAGAGAGGGACACCCCGTTTGCTACAATGCTTATGGAGTCTTCAGAGACAGAGAAATGTACGAGAGAATCTTCGGGGACGACGAGAAGCTCAAGAGATTCCTCAGATGGAGGGTTCAGGTTCTCGAACGAGGAATCAAGCTTCTCCATTTCAAGCCAGGCGGGGTTAATTCCCTGATTCAGGTCACAGATTTGAAAGACATGCCCAAACGAGAACTCAGAGTAGCTTCCAATCAGATCCTCTCTCTGTTCCAAGACAATTACCCCGAAATGGTAGCTCGTAAGATTTTCATCAATGTCCCATGGTACTTCAGCATGCTGTATTCGATGTTCAGTCCCTTTTTGACTCAAAGGACTAAGAGCAAGTTCGTGATCGCCAAGGAAGGCAATGCTGCGGAGACACTCTACAAATTCATAAGGCCTGAGGATATTCCTGTTCAGTATGGAGGACTGAGTCGGCCGAGTGATTTGCAGAATGGTCCCCCAAAACCTGCTTCTGAGTTCACTGTCAAAGGAGGAGAGAAAGTGAACATCCAAATTGAAGGAATTGAGGCTGGAGCAACGATAACATGGGACATAGTGGTGGGAGGGTGGGACTTAGAGTACAGTGTAGAGTTTGTCCCAAACGCAGAAGGAAGCTACACCATAGCAGTGGAGAAGCCAAGAAAAATTGGAGCCTCAGAGGAAGCCATACACAACTCTTTCACTACCAAAGAAGCAGGAAAATTGGTACTCTCTGTTGATAACTTAGCCTCTCGCAAGAAGAAAGTCGCTGCATATCGCTACGTGGTTCGCAAAAGCAACAACATTTGA 1269 0.4996 MEASASPTTTPFQNAPFQDLPEASPKPAYRKSFVTSLMEAATLRTPSFKEDTYFISHLKSSEKKALQDLKNRLAASKVSDSSMWGIPLLGGDDRADVILLKFLRARDFRVGDSLNMLLKCLAWRKEFGADDVVEEDLGFKELEGVIAYMQEYDREGHPVCYNAYGVFRDREMYERIFGDDEKLKRFLRWRVQVLERGIKLLHFKPGGVNSLIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVIAKEGNAAETLYKFIRPEDIPVQYGGLSRPSDLQNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSVEFVPNAEGSYTIAVEKPRKIGASEEAIHNSFTTKEAGKLVLSVDNLASRKKKVAAYRYVVRKSNNI 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0143 422 Gene3D GOLD domain 314 416 - -
Bisa10g0143 422 MobiDBLite consensus disorder prediction 1 17 - -
Bisa10g0143 422 SUPERFAMILY CRAL/TRIO domain 140 305 IPR036865 -
Bisa10g0143 422 SMART CRAL_TRIO_N_2 95 120 IPR011074 -
Bisa10g0143 422 Gene3D - 129 313 IPR036865 -
Bisa10g0143 422 SMART sec14_4 141 305 IPR001251 -
Bisa10g0143 422 CDD SEC14 139 303 IPR001251 -
Bisa10g0143 422 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 134 308 IPR001251 -
Bisa10g0143 422 MobiDBLite consensus disorder prediction 1 24 - -
Bisa10g0143 422 Pfam CRAL/TRIO, N-terminal domain 56 118 IPR011074 -
Bisa10g0143 422 PANTHER PATELLIN-1 41 419 IPR044834 GO:0008289
Bisa10g0143 422 ProSiteProfiles GOLD domain profile. 284 418 IPR009038 -
Bisa10g0143 422 Gene3D - 54 126 - -
Bisa10g0143 422 FunFam SEC14 cytosolic factor family protein 54 126 - -
Bisa10g0143 422 Pfam CRAL/TRIO domain 143 302 IPR001251 -
Bisa10g0143 422 SUPERFAMILY CRAL/TRIO N-terminal domain 49 136 IPR036273 -
Bisa10g0143 422 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 319 420 IPR036598 -
Bisa10g0143 422 FunFam SEC14 cytosolic factor family protein 143 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0143 Bisa-ChrBisa10 2335640 2338076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0143 99 297 Acyl Lipid Metabolism Gene Families AT5G47730 25.592 1.03e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0143 10 2335640 2338076 Bisa06g0101 06 1938583 1941982 CCT
Bisa10g0143 10 2335640 2338076 Bisa10g0143 10 2335640 2338076 ECH