Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0101 ATGGACTCCTCTGCTTCGCCCATCTCCTTCCAGGACCTTCCCGAAGCATCCCCAAAACCGTACAAGAAAAGCTTCGTCTCCACTCTAATGGAGGCAGCCTCCTTTCGCAGCACTCCTTCTTTCAAAGAAGACACCTACTTCATTTCCCACCTGAAATCTTCCGAGAAGAAAGCCCTTCAGGAGCTCAAGACCAAGCTCGCCGCCTCTGATTCCTCCGAATCCTCCATGTGGGGTGTTCCCCTTCTCGGGGGCGACGAAAAGGCTGACGTCATTCTCTTGAAATTCCTCCGAGCCAGAGATTTCAGGGTCGGAGACGCTCTCAACATGCTTCTCAAGTGCTTGGCTTGGAGAAAGGAGTTCAAAGCAGACGACGTCGTTGAGCAGGACTTGGGGTTCAAGGAGCTTGAAGGGGTTATAGCTTACATGCATGGATATGACAGAGAGGGACACCCTGTGTGCTACAACGCTTATGGGGTCTTCAAAGACAGAGAAATGTACGAGAGAATATTTGGGGACGAAGAGAAGCTCAAGAAATTTCTGAGATGGAGAGTTCAGGTTCTGGAGAAAGGCATTAAGCTTCTTCATTTCAAGCCTGGTGGCATTAATTCTATCATTCAAGTCACTGATCTTAAAGACATGCCTAAGAGAGAGCTGAGAGTAGCTTCTAATCAGATCCTCTCTTTGTTCCAAGACAATTACCCAGAAATGGTGGCTCGTACGATTTTCATCAATGTCCCATGGTACTTCAGCATGCTGTATTCAATGTTCAGTCCTTTTCTGACTCAGCGAACTAAGAGCAAGTTTGTGATCTCTAAGGAAGGATATGCTGCTGAGACACTCTTCAAATTTATAAGGCCTGAGGATATTCCAGTTCAGTATGGAGGACTGAGTAGAACCATAGATGTGCAGAATGGTCCCCCAAAGCCTGCTTCTGAGTTCACTGTGAAAGGGGGAGAGAAAGTCAACATACAAATTGAAGGAATTGAGGGTGGTGCAACAATCACGTGGGACATAGTGGTGGGAGGGTGGGACTTAGAGTACAGTGCTGAGTTCATTCCAAGCGCAGAAGGAAGCTACACCATAGCAGTGGAGAAGCCAAGGCACATGGGAGCCTCAGAAGAAGCAATCCACAACTCCTTCACCTCAAGAGAAGCAGGCAACATGGTTCTCTCTGTGGACAACACTTCTTCACGAAGAAGAAAAGTCGCTGCTTATCGCTACATCGTTCGCAAGTAG 1236 0.4765 MDSSASPISFQDLPEASPKPYKKSFVSTLMEAASFRSTPSFKEDTYFISHLKSSEKKALQELKTKLAASDSSESSMWGVPLLGGDEKADVILLKFLRARDFRVGDALNMLLKCLAWRKEFKADDVVEQDLGFKELEGVIAYMHGYDREGHPVCYNAYGVFKDREMYERIFGDEEKLKKFLRWRVQVLEKGIKLLHFKPGGINSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARTIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGYAAETLFKFIRPEDIPVQYGGLSRTIDVQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFIPSAEGSYTIAVEKPRHMGASEEAIHNSFTSREAGNMVLSVDNTSSRRRKVAAYRYIVRK 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0101 411 Pfam CRAL/TRIO domain 136 295 IPR001251 -
Bisa06g0101 411 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 312 409 IPR036598 -
Bisa06g0101 411 SMART sec14_4 134 298 IPR001251 -
Bisa06g0101 411 MobiDBLite consensus disorder prediction 1 20 - -
Bisa06g0101 411 FunFam SEC14 cytosolic factor family protein 47 119 - -
Bisa06g0101 411 CDD SEC14 132 296 IPR001251 -
Bisa06g0101 411 SUPERFAMILY CRAL/TRIO N-terminal domain 39 128 IPR036273 -
Bisa06g0101 411 SMART CRAL_TRIO_N_2 88 113 IPR011074 -
Bisa06g0101 411 SUPERFAMILY CRAL/TRIO domain 134 300 IPR036865 -
Bisa06g0101 411 Pfam CRAL/TRIO, N-terminal domain 58 111 IPR011074 -
Bisa06g0101 411 FunFam SEC14 cytosolic factor family protein 136 311 - -
Bisa06g0101 411 Gene3D - 47 119 - -
Bisa06g0101 411 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 142 301 IPR001251 -
Bisa06g0101 411 Gene3D GOLD domain 306 409 - -
Bisa06g0101 411 ProSiteProfiles GOLD domain profile. 277 411 IPR009038 -
Bisa06g0101 411 Gene3D - 131 305 IPR036865 -
Bisa06g0101 411 PANTHER PATELLIN-1 34 411 IPR044834 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0101 Bisa-ChrBisa06 1938583 1941982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0101 92 290 Acyl Lipid Metabolism Gene Families AT1G55840 27.536 6.59e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0143 10 2335640 2338076 Bisa06g0101 06 1938583 1941982 CCT