Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1773 ATGTGCTGTACTTTACCACTTTCTATCACACCAATGCTTTCTATCCTAAATCCTCCCCCAAACCTTTTTCACATTTCATTAGTTAATGCTCTTCTGGCCCCTTATTTTAATTTATTTTAGAGTTGTTGTTCCTTTTTTTGCTTCGGAGGAGACGACTGCTTGGGACGGGGCCCACTCAACACGCGGCCTTCTGATCGTTGTTTACTCTTTCTCTCGCACTGCACTGTTTCCTCCTTCGTCCCCTTTTCTTTTCCAATATCAAGCCTTCACCTGTCATTCTGGAGGCTTCTGTTGCATATTTCACTTTGCACGCAATTTATTTATTTTACTGTTCTGGGTATTTGCAGAAGTAGTCAAGTTTCTTCGTTGTTCCTCTTGTCTAGCTGTAGTGAACTTAGCGAAATGGTTGGGAAGGAGAACTTGAGGACCGAGGACTTGGACTTGTGCTTTGAGAAGCTTATAATGGTAGCAGGCGGTGGTGGCAGTGGAAATAGTAGTAGAGGAGTGAAAATGGAAGGTGGGGTGATCACCGAATGGAAGGATATTCCAGTTGAGCTTTTGATGCAGATTCTGTCCCTTGCGGATGATCAGACGGTGATAACAGCTTCTGGAGTCTGTCGTGGGTGGAGAGATGCCATTTGCTTCGCTCTTACTCGTTTATCACTCTCATGGTGTAGCAAGAACATGAATAACTTGGTCCTATCTTTTGCTCCTAAATTCACAAAATTACAAATTTTAATCCTTCGTCAAGACAAGCCTCAACTAGAGGATAATGCTGTTGAGACTGTCGCAAATTGCTGTCACGACCTGCAGATCCTGGACCTCAGCAAAAGTTTCAAGCTTACTGATCGGTCTCTGTATGCCTTAGCCAACGGATGTCCTAATCTTACAAAGCTGAACATCAGTGGGTGCTCATCATTTAGTGACATTGCACTAGTCTGCCTAGCCAGTTTCTGCCAAAAATTGAAATCTTTAAACCTCTGTGGATGTGTTAGAGCTGCATCTGATGCTGCGTTACAGGCTATTGGACGTTGGTGTAATCAGTTGCAGCTCCTGAACCTTGGTTGGTGCGAAAATGTCAGTGATGTTGGAGTGATGAGTTTAGCTGCCGGGTGCCCTGATCTTAGGACACTTGACTTATGTGGCTGTGTTCGTATAACAGATGACAGTGTAATTGCTTTGGCAAACGGGTGTCCTCATCTGAGGTCCCTTGGGCTGTACTACTGTCAAAACATAACGGACAGAGCAATGTATTCATTGGCCCAGAGCAAAGTGAATAACAGGACGTGGGGATCTGTGAAAGGCAAAAGTGAAGAGGATGGTCTAACGGGGCTCAACATTAGCCAATGTACAGCACTAACTCCCTCTGCTGTTCAAGCCGTATGTGACTCATTCCCGGCACTTCACACCTGCTCCGGCCGGCATTCGCTCATCATTAGTGGCTGCTTGAACTTGACTTCTGTACACTGTGCTTGTGCTGTGCATTCACATCGAGCAATCACCGCTCTTCCTTATCAAGCTCATTGA 1527 0.4525 MCCTLPLSITPMLSILNPPPNLFHISLVNALLAPYFNLFXSCCSFFCFGGDDCLGRGPLNTRPSDRCLLFLSHCTVSSFVPFSFPISSLHLSFWRLLLHISLCTQFIYFTVLGICRSSQVSSLFLLSSCSELSEMVGKENLRTEDLDLCFEKLIMVAGGGGSGNSSRGVKMEGGVITEWKDIPVELLMQILSLADDQTVITASGVCRGWRDAICFALTRLSLSWCSKNMNNLVLSFAPKFTKLQILILRQDKPQLEDNAVETVANCCHDLQILDLSKSFKLTDRSLYALANGCPNLTKLNISGCSSFSDIALVCLASFCQKLKSLNLCGCVRAASDAALQAIGRWCNQLQLLNLGWCENVSDVGVMSLAAGCPDLRTLDLCGCVRITDDSVIALANGCPHLRSLGLYYCQNITDRAMYSLAQSKVNNRTWGSVKGKSEEDGLTGLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIISGCLNLTSVHCACAVHSHRAITALPYQAH 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1773 508 SUPERFAMILY RNI-like 213 488 - -
Bisa09g1773 508 SUPERFAMILY F-box domain 176 214 IPR036047 GO:0005515
Bisa09g1773 508 Gene3D Ribonuclease Inhibitor 175 438 IPR032675 -
Bisa09g1773 508 CDD F-box_AtSKP2-like 178 225 - -
Bisa09g1773 508 SMART LRR_CC_2 319 345 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 267 292 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 398 423 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 293 318 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 439 464 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 214 239 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 346 371 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 372 397 IPR006553 -
Bisa09g1773 508 SMART LRR_CC_2 240 266 IPR006553 -
Bisa09g1773 508 PANTHER UNCHARACTERIZED 394 503 - -
Bisa09g1773 508 FunFam F-box protein SKP2B 214 432 - -
Bisa09g1773 508 Pfam F-box-like 180 214 IPR001810 GO:0005515
Bisa09g1773 508 Pfam Leucine Rich repeat 398 421 IPR001611 GO:0005515
Bisa09g1773 508 Pfam Leucine Rich repeat 293 316 IPR001611 GO:0005515
Bisa09g1773 508 Pfam Leucine Rich repeat 372 395 IPR001611 GO:0005515
Bisa09g1773 508 Pfam Leucine Rich repeat 349 369 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1773 Bisa-ChrBisa09 27547386 27554304 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0865 05 14442899 14446104 Bisa09g1773 09 27547386 27554304 CCT
Bisa09g1773 09 27547386 27554304 Bisa09g1773 09 27547386 27554304 ECH