Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0865 ATGTGCTTTCCATTTCTTGATCATCTGCCCTGTGTTCATGTACTTTCAAGTTTCTCTGAGTTGATTTTCGTTGGAAAGATCTCTAATACTCTCTATTTGGTTGTAGAAACGAGGAAGCGAGGAGCTAGAAGGGCGGCGCTAGTGTGGACTTGGAGTGAAATGGTAGGAAAGGAGAACTTGAGGACTGAGGACTTGAATACGTGCTTTGAGAAGCTTATGATGGTTGCAGGGGGTGAAGTTACTGGAAACAGTGCTAAAGGAGTGAGAATGGAGGGTGGTGTGATCTCAGACTGGAAAGATATTCCGGTGGACCTTTTGATTCAAATTCTGGGGTTTGTGGATGGTCAGACGGTGATCTCAGCTTCTGGTGTCTGTCGTGATTGGAGAGATGCTGTTTGCTTTCGCCTCACCCGTTTATCACTCTCATGGTGCAGCAAGAACATGAACAACTTGGTCCTATCTCTTGCTCCTAAATTCACAAAGTTGCAAACTCTAATCCTTCGTCAAAACAAGCCTCAACTACAGGATGATGCTGTTGAGACTATTGCAAAGTGCTGTCATGACCTGCAAATCCTGGACCTGAGCAAAAGTTTCAAGCTGACAGATCGTTCACTGTATGCCTTAGCTGATGGTTGTCCTGACCTCACAAAACTGAACATCAGTGGGTGTGCGTCATTTAGGGACACTGCTCTGGCTAACCTAGCCAGTTTCTGCAGATCATTGAAAAGTTTGAACCTCTGTGGATGTGTGGAAGCTGCGTCTGACACTGCATTGCAGGCTATTGGAAGTTACTGCAATCAGTTGCAGTCTTTGAATCTTGGATGGTGTGAATTTGTTAGTGATGTTGGAGTGATGAGTCTTGCATATGGATGCCCTGATCTTCGAACCGTTGACTTGTGTGGCTGCGTCTGCATAACAGATGATAGTGTGATAGCATTGGCAAACAGTTGCCCACGTCTGAGGTCACTGGGGCTGTACTACTGTCGGAACATCACCGACAGGGCAATGTACTCATTGGCACAAAGCAAATTGAATCACAGGATGTGGGGAACAGTGGGAGAAGGGAACGAGGAAGAAGGGCTGAGGACTCTGAACATAAGCCAATGCACAGCACTGACCCCCTCGGCGGTGCAGGCGGTGTGTGACTCATTCCCGGCACTTCACACATGCTCAGGCAGGCATTCTCTCATCATGAGTGGCTGCCTCAGCCTCACCTCTGTGCACTGTACTTGTGCTGTGCAGGCCCACCGTGCTTTCACCACTCTCCCTCATCCTCCTCATTGA 1284 0.4798 MCFPFLDHLPCVHVLSSFSELIFVGKISNTLYLVVETRKRGARRAALVWTWSEMVGKENLRTEDLNTCFEKLMMVAGGEVTGNSAKGVRMEGGVISDWKDIPVDLLIQILGFVDGQTVISASGVCRDWRDAVCFRLTRLSLSWCSKNMNNLVLSLAPKFTKLQTLILRQNKPQLQDDAVETIAKCCHDLQILDLSKSFKLTDRSLYALADGCPDLTKLNISGCASFRDTALANLASFCRSLKSLNLCGCVEAASDTALQAIGSYCNQLQSLNLGWCEFVSDVGVMSLAYGCPDLRTVDLCGCVCITDDSVIALANSCPRLRSLGLYYCRNITDRAMYSLAQSKLNHRMWGTVGEGNEEEGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLSLTSVHCTCAVQAHRAFTTLPHPPH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0865 427 FunFam F-box protein SKP2B 133 351 - -
Bisa05g0865 427 Gene3D Ribonuclease Inhibitor 132 348 IPR032675 -
Bisa05g0865 427 CDD F-box_AtSKP2-like 98 144 - -
Bisa05g0865 427 Gene3D - 97 131 - -
Bisa05g0865 427 Pfam Leucine Rich repeat 291 314 IPR001611 GO:0005515
Bisa05g0865 427 Pfam Leucine Rich repeat 265 288 IPR001611 GO:0005515
Bisa05g0865 427 PANTHER UNCHARACTERIZED 123 391 - -
Bisa05g0865 427 Pfam F-box-like 99 132 IPR001810 GO:0005515
Bisa05g0865 427 SUPERFAMILY F-box domain 96 142 IPR036047 GO:0005515
Bisa05g0865 427 SMART LRR_CC_2 291 316 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 358 383 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 317 342 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 133 158 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 212 237 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 265 290 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 238 264 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 159 185 IPR006553 -
Bisa05g0865 427 SMART LRR_CC_2 186 211 IPR006553 -
Bisa05g0865 427 SUPERFAMILY RNI-like 132 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0865 Bisa-ChrBisa05 14442899 14446104 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0865 05 14442899 14446104 Bisa09g1773 09 27547386 27554304 CCT
Bisa05g0865 05 14442899 14446104 Bisa05g0865 05 14442899 14446104 ECH