Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1731 ATGTGTCCCCTGACCCCAACCGACTTGCAGCGTATTTTTGAGAAGCTGGACATGAATGGTGACGGGTTCGTGAGCCTCGAAGAGCTAAACTGGCTGCTGGAGAAGATAGGTTTTCAGTTCAGCCCACAGGAGCTGGAGTCTCTGACAGGAAAACAGAGCCTTGACTTGACTGAGTTCTTGTTCTTTTACGAGTCCATATCGAAGCAGAACAAGGGAGAGAAGAAAAGAGGTGAGGATGAGGATGAGGATGATGATGACGACGCCCTTGTGAAGGCCTTCAAGGTGTTTGATTTGGATGGAGATGGGTTCATCACAAGCCAAGAGCTTGAGTGTGTGTTGAAGAGGCTTGGCTTGTGGAACACTAATTCTGATTGCACAAGCATGATTTGTGTGTATGATACTAATTCAGATGGCAGGCTTGATTTCGAGGAGTTTAAACACATGATGCTTCTTACTTCTTCCTCTTAA 468 0.4615 MCPLTPTDLQRIFEKLDMNGDGFVSLEELNWLLEKIGFQFSPQELESLTGKQSLDLTEFLFFYESISKQNKGEKKRGEDEDEDDDDDALVKAFKVFDLDGDGFITSQELECVLKRLGLWNTNSDCTSMICVYDTNSDGRLDFEEFKHMMLLTSSS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1731 155 CDD EFh 89 149 IPR002048 GO:0005509
Bisa09g1731 155 Pfam EF-hand domain pair 88 149 IPR002048 GO:0005509
Bisa09g1731 155 ProSiteProfiles EF-hand calcium-binding domain profile. 84 119 IPR002048 GO:0005509
Bisa09g1731 155 ProSiteProfiles EF-hand calcium-binding domain profile. 120 155 IPR002048 GO:0005509
Bisa09g1731 155 SMART efh_1 88 116 IPR002048 GO:0005509
Bisa09g1731 155 SMART efh_1 124 152 IPR002048 GO:0005509
Bisa09g1731 155 SMART efh_1 8 36 IPR002048 GO:0005509
Bisa09g1731 155 FunFam Probable calcium-binding protein CML44 5 66 - -
Bisa09g1731 155 ProSitePatterns EF-hand calcium-binding domain. 133 145 IPR018247 -
Bisa09g1731 155 SUPERFAMILY EF-hand 8 150 IPR011992 -
Bisa09g1731 155 Pfam EF hand 9 29 IPR002048 GO:0005509
Bisa09g1731 155 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 71 149 - -
Bisa09g1731 155 FunFam Calmodulin-2 A 78 154 - -
Bisa09g1731 155 Gene3D - 5 63 - -
Bisa09g1731 155 ProSitePatterns EF-hand calcium-binding domain. 97 109 IPR018247 -
Bisa09g1731 155 Gene3D - 64 154 - -
Bisa09g1731 155 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Bisa09g1731 155 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1731 Bisa-ChrBisa09 26009046 26009513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1731 4 150 EF-hand Containing Proteins AT1G21550 49.333 1.45e-40 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0896 05 15487163 15487651 Bisa09g1731 09 26009046 26009513 CCT
Bisa09g1731 09 26009046 26009513 Bisa09g1731 09 26009046 26009513 ECH