Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g0896 ATGTCTCCTCTGACCCCCGGTGACTTGCAGAGGATATTTGAGAAGCTGGACAAGAATGGGGATGATTTTTTGAGGCTTGAGAGTCTAAATAAGCTTCTAGAGATGGTGGGTTTTCAGTTTGGAATAGAGGAGGTTGAGTCTCTGGTGGGGAAGACGAGGCTTGACTTCAATGAGTTCTTGTCGTTTTACGAGTCCATAACAAAGAATAAGAGAAACTGTAGTAGTAATGAAGAGAGAGAAGGGGAAGAAGAAGAAGAAGAAGAAGAAGAGGTGGAGAGGGACCTAGTGAAGGCGTTCTCGGTGTTTGATATGGATGGAGATGGATTCATAAGCAGCCAAGAGGTGGAGTGTGTGTTGAGGAGGCTGGGCTTGTGGGACGACAAGAAGGGGACGGATTGCAGAAGCATGATTTGTGCTTATGACACCAATTTGGATGGCCTGCTTGATTTCCAGGAATTTAAGAACATGATGTTGCTTACCATCCCATGA 489 0.454 MSPLTPGDLQRIFEKLDKNGDDFLRLESLNKLLEMVGFQFGIEEVESLVGKTRLDFNEFLSFYESITKNKRNCSSNEEREGEEEEEEEEEVERDLVKAFSVFDMDGDGFISSQEVECVLRRLGLWDDKKGTDCRSMICAYDTNLDGLLDFQEFKNMMLLTIP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g0896 162 CDD EFh 94 157 IPR002048 GO:0005509
Bisa05g0896 162 FunFam Probable calcium-binding protein CML44 67 160 - -
Bisa05g0896 162 SUPERFAMILY EF-hand 8 159 IPR011992 -
Bisa05g0896 162 ProSitePatterns EF-hand calcium-binding domain. 103 115 IPR018247 -
Bisa05g0896 162 Gene3D - 65 157 - -
Bisa05g0896 162 ProSiteProfiles EF-hand calcium-binding domain profile. 90 125 IPR002048 GO:0005509
Bisa05g0896 162 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Bisa05g0896 162 SMART efh_1 132 160 IPR002048 GO:0005509
Bisa05g0896 162 SMART efh_1 8 36 IPR002048 GO:0005509
Bisa05g0896 162 SMART efh_1 94 122 IPR002048 GO:0005509
Bisa05g0896 162 ProSiteProfiles EF-hand calcium-binding domain profile. 128 162 IPR002048 GO:0005509
Bisa05g0896 162 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 10 157 - -
Bisa05g0896 162 Coils Coil 74 94 - -
Bisa05g0896 162 Pfam EF-hand domain pair 94 157 IPR002048 GO:0005509
Bisa05g0896 162 Gene3D - 7 64 - -
Bisa05g0896 162 MobiDBLite consensus disorder prediction 70 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g0896 Bisa-ChrBisa05 15487163 15487651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g0896 2 158 EF-hand Containing Proteins AT1G21550 39.873 7.72e-33 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0896 05 15487163 15487651 Bisa09g1731 09 26009046 26009513 CCT
Bisa05g0896 05 15487163 15487651 Bisa05g0896 05 15487163 15487651 ECH