Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1564 ATGGCAGGAAAGGCCAAGAACAAGGCGGTGGAGAATGATTTGGGTTGTGGTTTTATGGGGAGGCTTTTCCAACTCAGAAACTATAAGCTGAGAAAATCTTCTGTTCATTCACTGCCCATGAGGCCTCCAAATCAAGAATCCAAGAGTAATCCCACTGAGTCACACAATCCAGCCAGAAAGAACACTTCCAATCATCCAACACCCTCTGCCCACCGAAACAGTCAAAATCGAAGACCTTCTGATGCTGCAAGAAGCTCGACATCATCCTCTGGTAATTCAACCCAAACAAAGACTCAACAGAACCACCACTTGAATAATGACTGCAAGACTGGTAACTCTCCGGAGCTTGCCTGGATAAGTACTCATCACCAGCGAGATAACGAGAACAAGTCCCCTCTCAAGATTACTGGTAATTTGCTGGTAAATAACAGCCCAAGAACTAATACCAAGATTGTGGAAAGCGTTCCCAAGAGTAAAGATATGAACTTTGTGCACAGTTCTTACAATAACGCCGGCATAGGTGTAATGGGGAATATCAGGAGGAGGAACAGTGATGAGCTTGCGCAATTCCGAAGTCCGACAAACAGAGTAGACCCAGAGGCGTTGAAGACAATGGGAAATGAAGCGTACAAGCAGGGGAGATTCGAAGAGGCTTTGGCTTTGTATGATCGAGCCATTGCTATTGATTCAAATAAAGCCACGTATCATTGCAATAAGAGTGCAGCTTTAATAGGTTTGGGCCGTCTTCTGGAAGCGATTGTTGAGTGCCAGGAAGCTATCCGGCTAGAGCCTTCTTATGGCAGACCTCATCACCGTTTGGCAACCATATATCTCAGACTGGGGGAACCAGAAAAAGCACTAAGTTACAATGGCACTACCCCATATTCTGATTCAGCACTCGCTTTTCAAGCTCGCTCTCTTCAGACTCACCTTCAGAAATGTATTCAAGCCCGGAAAGTCAATGAATGGGAAGTTATACTAAAGGAAACACAGTCTGCAATATCATTAGGTGCTGATTCGAGTCCTCAGATTTATGCTCTACAAACAGAAGCCTTACTTAGGCTCTTCAGACATCAAGAGGCATATGCTACCTATGAGAAAATGCCCAAATTTGCACTTAATTGGTGTACCAAGTTATTTGGTCTCGCTCGTAGCGCTTACCTGTTGATGATAGGCGCTCAGGTTCACTTGTCAGCCGGCAGGTATGAGGATGCTGTGGCAGCAGCTGAGCAAGCAGCTAAACTTGATCCAAGCGACAAAGAGGTGAATGCAATTGTGAAGAAGGGGAGAGCGGTGACGTCAGCCAGAACGAGTGGTAACTTGCTGTTCAAGGCATCCAAATTTAAGGAAGCATGTGCAGTGTACAACGAAGGACTGGAGCATGATCAGTATAACTCGGTTCTACTGTGCAACAGAGCAGCATGTCGTTCTAAGCTTGGCCAATTTGAGAAAGCAATTGAGGACTGTAATACAGCTCTTGCTGTTCAGCCTAGTTACAGCAAGGCGCGGTTAAGGAGAGCAGATTGCAATGCCAAGTTGGAAAGATGGGAAGCTGCCATTGAAGACTATGAAATGCTATTGAGAGAAAAGCCAGGGGATGAGGAAGTGGGGAGGGCTCTGTTTGAGGCGCAGCAGCAACTGAAAATGCTGCGTGGGGAAGATATTAAGGACTTGAAATTTGGGTCTAATTTGGTGTTTATATCCAGCAATGATCGGTTTAGACGTTATGTAACCTCACCTGGGATGTCTGTGGTGCTGTTTTGCAACAAGGCAACCCAGAAGCAAGAGTTGCTAGTGTTGGAGCAGACCTGCAAGAGATTTCCATCCATTAATTTCCTCAAGGTGGAGATTGAAGACCATCCGTACTTGGCGAAATCAGAAGGCGTGAGCTCTATCCCAGCCTTCAAAATATACAAGAATGGATCGAGGATTAAGGAAATTCCAGGAAACAACCACGAGTTGTTGGAAAAATCAGTTAAATTATATAGCAGCTGA 1995 0.4531 MAGKAKNKAVENDLGCGFMGRLFQLRNYKLRKSSVHSLPMRPPNQESKSNPTESHNPARKNTSNHPTPSAHRNSQNRRPSDAARSSTSSSGNSTQTKTQQNHHLNNDCKTGNSPELAWISTHHQRDNENKSPLKITGNLLVNNSPRTNTKIVESVPKSKDMNFVHSSYNNAGIGVMGNIRRRNSDELAQFRSPTNRVDPEALKTMGNEAYKQGRFEEALALYDRAIAIDSNKATYHCNKSAALIGLGRLLEAIVECQEAIRLEPSYGRPHHRLATIYLRLGEPEKALSYNGTTPYSDSALAFQARSLQTHLQKCIQARKVNEWEVILKETQSAISLGADSSPQIYALQTEALLRLFRHQEAYATYEKMPKFALNWCTKLFGLARSAYLLMIGAQVHLSAGRYEDAVAAAEQAAKLDPSDKEVNAIVKKGRAVTSARTSGNLLFKASKFKEACAVYNEGLEHDQYNSVLLCNRAACRSKLGQFEKAIEDCNTALAVQPSYSKARLRRADCNAKLERWEAAIEDYEMLLREKPGDEEVGRALFEAQQQLKMLRGEDIKDLKFGSNLVFISSNDRFRRYVTSPGMSVVLFCNKATQKQELLVLEQTCKRFPSINFLKVEIEDHPYLAKSEGVSSIPAFKIYKNGSRIKEIPGNNHELLEKSVKLYSS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1564 664 ProSiteProfiles TPR repeat profile. 386 419 IPR019734 GO:0005515
Bisa09g1564 664 SMART tpr_5 386 419 IPR019734 GO:0005515
Bisa09g1564 664 SMART tpr_5 432 465 IPR019734 GO:0005515
Bisa09g1564 664 SMART tpr_5 500 533 IPR019734 GO:0005515
Bisa09g1564 664 SMART tpr_5 233 266 IPR019734 GO:0005515
Bisa09g1564 664 SMART tpr_5 466 499 IPR019734 GO:0005515
Bisa09g1564 664 SMART tpr_5 199 232 IPR019734 GO:0005515
Bisa09g1564 664 CDD TRX_family 573 660 - -
Bisa09g1564 664 Pfam TPR repeat 206 241 - -
Bisa09g1564 664 Pfam Tetratricopeptide repeat 468 499 IPR001440 GO:0005515
Bisa09g1564 664 SUPERFAMILY TPR-like 198 421 IPR011990 GO:0005515
Bisa09g1564 664 SUPERFAMILY TPR-like 438 548 IPR011990 GO:0005515
Bisa09g1564 664 SUPERFAMILY Thioredoxin-like 542 659 IPR036249 -
Bisa09g1564 664 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 6 660 IPR044534 -
Bisa09g1564 664 Gene3D Tetratricopeptide repeat domain 197 551 IPR011990 GO:0005515
Bisa09g1564 664 ProSiteProfiles TPR repeat profile. 199 232 IPR019734 GO:0005515
Bisa09g1564 664 Pfam Thioredoxin 600 657 IPR013766 -
Bisa09g1564 664 Coils Coil 506 526 - -
Bisa09g1564 664 MobiDBLite consensus disorder prediction 38 111 - -
Bisa09g1564 664 MobiDBLite consensus disorder prediction 34 111 - -
Bisa09g1564 664 Gene3D Glutaredoxin 559 663 - -
Bisa09g1564 664 Pfam Tetratricopeptide repeat 393 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1564 Bisa-ChrBisa09 23192545 23195723 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1053 05 18076673 18079232 Bisa09g1564 09 23192545 23195723 CCT
Bisa09g1564 09 23192545 23195723 Bisa09g1564 09 23192545 23195723 ECH