Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1053 ATGGCAGAGAAGGCGAAGAACAAAGTGAAGAATGAAGTGGGTTCTGGCTTTTTGGGAAGAATTTTCCTCCTCAAAAGCTATAGGCTGAGAAATTCCTCTGTTCATTCGCTACCCATGAAGCCTACCAACAATGTCCAAAGCAATCAGACCAAAAACCCTCCAAAAAATGAATCCAAGACTCTGCGAAATATCTCCACTGAGTCCCACAAACCAAATTCAGATCCCAGAAAGAGCACCTCCGGTCACCGGAGACCCTCAGAAGCTGCTAGAAGCTCATCATCATCATCTTCCGGTAATTCAATTTCGACGCACACAAAGAATGACGAGAGCAAATTACAGAAAGAGCCCATCGAAAATTCTCTGGTGCTTGCTAGGATAAGCACCAGTCAACAGCGAGACAAGGAGAACAAAGGTTTAGTTAACTTGAAACTTACTGGTAATTTGGTTGCGAATAACAGCCCAAGAAGTGGTATTACCAAGAAAGTGGAATGCGTTACCAGGAGTAAAGAGTCGAACTTTATGACTAGTTCTTACAATAACGCCGTGATGGGGAACATCATGAGGAAGAACAGCGATGACGTGACGCAATTCCGGAGTCCGAGGAACAGAGTAAACCCTGAAGTGTTGAAGACTATGGGAAATCAAGCCCACAAGCAGGGGAAATTCGAAGAGGCTTTAAGTTTGTATAATCAAGCCATTCGTCTTGATTCAAATAAGGCAACGTATCATTGCAATAAGAGTGCAGCTTTGATGGGTCTAGGCCGCTTTCTGGAAGCATTGGTGGAATGCGAGGAAGCTATTCGTCTTGAACCTTCCTATACCAGAGCTCATCACCGTTTGGCGACCATATATCTCAGACTGGGAGAAGCAGAGAAGGCGATGGATTGCAATAACACAACCCAGTGTGGGGATTCTGTACTGGCTCTCCAAGCTCAGGCTCTTCAAAATCACATTCAAAAATGCATTGAAGCTCGGAAGAGAAATGAATGGAACACTATATTAAAGGAAACACTGTCTGCAATATCATTAGGTGCTGATTCAGCTCCACAGATGTATGCTCTACGAACAGAAGCCTTACTCAAGCTCCTGAAACACGAAGAGGCATATTCTACCTATGAAAAAATGCCAAAATTTGAACTTGTTTGGTGTAACAAGCTTTTTGGGTTGCCTCGTAGTGCTTATATATTAACGATAGGCGCTCAGGTTTACTTGGCAGCAGGCAGGTTCGACGATGCTGTAATAGCTGCTCAGCAAGCAGCTGAACTTGATCCAGAAAACAAAGAGGTGAATAGGGTGGTAAGAAGGAGTAGAGCAGTGAGATCAGCGAGAATGAGTGGAAATTTGCTGTTTAAGGAATCAAAATTCATGGAAGCATGCGGGGTGTACAACGAAGGGCTAGAGCATGATCCATTTAACTCGGTTCTGCTATGCAATAGAGCAGCATGTCGTTCTAAGCTGGGCCAGTTCGAGAAAGCAATTGAAGATTGTAACAAAGCCCTCACGGTTCAGCCTTATTACAGCAAGGCAAGGTTACGGAGGGCAGATTGCAATGCTAAGTTGGAAAGATGGGAAGCTGCCATTCAAGACTATGAGACGCTGATAAGAGAGAAGCCAGGGGATGAGGAGGTGGCAAGGGCTCTGTTTGAGGCCCAACTTCAGCTCAAGATGCTGCGTGGGGAAGACATTAAAGGCTTGAAATTTGGGTCCAATTTGGTTTTGATCTCAAGCAATGATCGGTTCAGACACTATGTGACCTCACCTGGAATGTCTGTGGTGCTCTTCTGCAACAAGGCAACCCAGAAGCAAGTTTTACTGGTGTTGGAGCAAACCTGCAAGAGATTCCCATCTGTCAGTTTCCTCAAGGTGGAGGTTGAGGACCATCCCTACCTAGCAAAATCAGAGGGAGTGAGCTCTGTCCCAGCATTCAGAATATACAAGAACGGATCAAGGGTCAAGGAAATTCCAGGAAACAAACACGAGTTGTTAGAAAAATCAGTTAAATTGTATAGTAGCTGA 2016 0.4469 MAEKAKNKVKNEVGSGFLGRIFLLKSYRLRNSSVHSLPMKPTNNVQSNQTKNPPKNESKTLRNISTESHKPNSDPRKSTSGHRRPSEAARSSSSSSSGNSISTHTKNDESKLQKEPIENSLVLARISTSQQRDKENKGLVNLKLTGNLVANNSPRSGITKKVECVTRSKESNFMTSSYNNAVMGNIMRKNSDDVTQFRSPRNRVNPEVLKTMGNQAHKQGKFEEALSLYNQAIRLDSNKATYHCNKSAALMGLGRFLEALVECEEAIRLEPSYTRAHHRLATIYLRLGEAEKAMDCNNTTQCGDSVLALQAQALQNHIQKCIEARKRNEWNTILKETLSAISLGADSAPQMYALRTEALLKLLKHEEAYSTYEKMPKFELVWCNKLFGLPRSAYILTIGAQVYLAAGRFDDAVIAAQQAAELDPENKEVNRVVRRSRAVRSARMSGNLLFKESKFMEACGVYNEGLEHDPFNSVLLCNRAACRSKLGQFEKAIEDCNKALTVQPYYSKARLRRADCNAKLERWEAAIQDYETLIREKPGDEEVARALFEAQLQLKMLRGEDIKGLKFGSNLVLISSNDRFRHYVTSPGMSVVLFCNKATQKQVLLVLEQTCKRFPSVSFLKVEVEDHPYLAKSEGVSSVPAFRIYKNGSRVKEIPGNKHELLEKSVKLYSS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1053 671 CDD TRX_family 580 664 - -
Bisa05g1053 671 MobiDBLite consensus disorder prediction 85 106 - -
Bisa05g1053 671 Gene3D Glutaredoxin 566 670 - -
Bisa05g1053 671 MobiDBLite consensus disorder prediction 34 68 - -
Bisa05g1053 671 Pfam TPR repeat 213 254 - -
Bisa05g1053 671 SUPERFAMILY TPR-like 443 555 IPR011990 GO:0005515
Bisa05g1053 671 SUPERFAMILY TPR-like 205 428 IPR011990 GO:0005515
Bisa05g1053 671 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 16 667 IPR044534 -
Bisa05g1053 671 Pfam Tetratricopeptide repeat 509 538 IPR019734 GO:0005515
Bisa05g1053 671 Pfam Thioredoxin 603 664 IPR013766 -
Bisa05g1053 671 MobiDBLite consensus disorder prediction 34 116 - -
Bisa05g1053 671 MobiDBLite consensus disorder prediction 69 84 - -
Bisa05g1053 671 Coils Coil 513 533 - -
Bisa05g1053 671 Gene3D Tetratricopeptide repeat domain 205 558 IPR011990 GO:0005515
Bisa05g1053 671 ProSiteProfiles TPR repeat profile. 393 426 IPR019734 GO:0005515
Bisa05g1053 671 Pfam Tetratricopeptide repeat 475 505 IPR001440 GO:0005515
Bisa05g1053 671 ProSiteProfiles TPR repeat profile. 206 239 IPR019734 GO:0005515
Bisa05g1053 671 ProSiteProfiles TPR repeat profile. 473 506 IPR019734 GO:0005515
Bisa05g1053 671 SMART tpr_5 439 472 IPR019734 GO:0005515
Bisa05g1053 671 SMART tpr_5 507 540 IPR019734 GO:0005515
Bisa05g1053 671 SMART tpr_5 473 506 IPR019734 GO:0005515
Bisa05g1053 671 SMART tpr_5 240 273 IPR019734 GO:0005515
Bisa05g1053 671 SMART tpr_5 206 239 IPR019734 GO:0005515
Bisa05g1053 671 SMART tpr_5 393 426 IPR019734 GO:0005515
Bisa05g1053 671 Pfam Tetratricopeptide repeat 400 472 - -
Bisa05g1053 671 SUPERFAMILY Thioredoxin-like 570 657 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1053 Bisa-ChrBisa05 18076673 18079232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1053 218 294 Glycosyltransferase AT3G04240 32.468 3.21e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1053 05 18076673 18079232 Bisa09g1564 09 23192545 23195723 CCT