Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2079 ATGTTGCAGGCCAGCGAATTGGCTGTGTCGATTGATGGCTATGAGACTGTCCCTCCGAACGATGAGGACTCATTGCTCAAAGTTGTTGCTAACCAACCTGCATCTGTAGCCATAGATGCTGGGGGATATGATTTCCAGTTCTACTCAGAGGGAGTTTTTACTGGTGAGTGTGGGAAAGATCTGAATCATGGGGTGGCGATTGTGGGGTATGGAGCAACTCTTGATGGAACCAAATATTGGACAGTGAAGAACTCTTGGGATCCGAATGGGGCGAACAGGGTTACATCAGGATGCAGAGGGGTGTATCTGACAAGGAAGGACTCTGTGGCATAG 333 0.4895 MLQASELAVSIDGYETVPPNDEDSLLKVVANQPASVAIDAGGYDFQFYSEGVFTGECGKDLNHGVAIVGYGATLDGTKYWTVKNSWDPNGANRVTSGCRGVYLTRKDSVA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2079 110 Pfam Papain family cysteine protease 7 89 IPR000668 GO:0006508|GO:0008234
Bisa08g2079 110 SUPERFAMILY Cysteine proteinases 7 86 IPR038765 -
Bisa08g2079 110 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 61 71 IPR025660 -
Bisa08g2079 110 SMART pept_c1 4 101 IPR000668 GO:0006508|GO:0008234
Bisa08g2079 110 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 8 89 IPR013128 GO:0008234
Bisa08g2079 110 Gene3D Cysteine proteinases 3 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2079 Bisa-ChrBisa08 49880677 49881687 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2079 08 49880677 49881687 Bisa02g1197 02 20115704 20117637 CCT
Bisa08g2079 08 49880677 49881687 Bisa08g2079 08 49880677 49881687 ECH