Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2032 ATGGATCCCAATCCTGGACACTTCCCTATTCTCTCATACGTCATGTCTCGTGTCTCTTCCGTCGCTCCCAGACCACCCACCGCCTCCGATTCCCCCAATTTCGTCGACGTCGAACAGCCCCGCTTTCCTCCTTCCTCCGATCATTCCTCTTCCTCTTCTCCTTCCTCCTTGCCTCAAATCACCGACCCCGAACTCTTGGCCTCCATGACCCGCACCATCTACGACGTCGTGCAGACCCGATCCATGCTGCGACTCCTCGGCGACCGTCCCGACCACGAGGCCGTCGACAATGCGAAGGCGAAGGTTGCCGATCTGGAAGCGCATTTGTCCAGACAGCTCGAAGGGATCGTGCTCTCCCCCAGGCCTCAAGAGACCGATGTCAACCAGTGGCGGAACCACCAGGCCGAGAAGGAGAAGGAGTTGAGGAAATTGGCGGAGGATGAGAAGCGAGTGTACAAAGCAGTGATTCAATTGGACCAGATGCACGACGCCTATGAGAAATTGCTCAAGGATGCAGAGAAGAGATTGGTGAAGATTTACAATTCTGCCGGCGACTACGGAGCAGGAGATGATGAGGAAGGTAAGCCGGAGAAGGAGGAGATCAATGAAGAGGTCGTCGGGATTCTGCAAAAGGCTTATGGACAAGGGATGGAGCGAGTCGATATTTCCAGTCGCGGCCTGAAGGTGCTTCCTGAGGCGTTTGGACGGATTTCTGGCTTGGCGGTTCTTATTGTTTCAAACAATCAACTCACGGTGATTCCTGACTCAATAGCTGGATTGGAAAATCTTGAGGAGCTTAACGTAGCTACAAATCTTCTAGACTCATTGCCGGATTCAATTGGCTTGCTACAAAAGTTGAAATACCTGAATGTCTCTGGAAACAAACTAAGTGCCCTTCCTGATTCCATCTGTCATTGCAGGTCATTGGTAGAGCTGGATGCGAGCTTCAATGGTCTCAGGTATTTGCCTACAAACATTGGGTATGAATTAAAGAACTTAAAGAAGCTCTTGGTTCATTTGAACAAACTTCGATCGCTTCCCTCATCTATTTGTGAGATGAGATCCTTGCGCTATCTGGATGCTCATTTCAATGAGCTGCAGTGGCTTCCTAATTCAATTGGGAAACTGACCAATCTTGAAGTTCTCAATCTTAGCAGCAACTTCTCTGACCTTCAAGAACTTCCTATGTCTTTTGGTGATCTGATTAACCTCAGGGAATTAAATCTCAGTAACAATCAGATCAGTGCACTTCCGGATACATTTGGTCGTCTTGACAATTTGATCAAACTCAACTTAGAGCAGAACCCTCTGCAAATACCACCGAAGGAGGTTGTGAGGCAAGGAATTCAAACAGTGAAAACTTACATGACTAACCGATGGGTTGAAATATTAAACGAGCAAGAAAGAAGCAAGGTTGCAATGCAAGAACAAGAAGAGATAGGTTGGTTAACAAGAAGTGCCTCCTTGCTGAGGAGCTTTTCTGGAGCTATTACAGGATATGCTTCAGGTCCTCCTGTATCTCAGAAAGAGGCTTATCTTCATGAGCAAATATGA 1554 0.4781 MDPNPGHFPILSYVMSRVSSVAPRPPTASDSPNFVDVEQPRFPPSSDHSSSSSPSSLPQITDPELLASMTRTIYDVVQTRSMLRLLGDRPDHEAVDNAKAKVADLEAHLSRQLEGIVLSPRPQETDVNQWRNHQAEKEKELRKLAEDEKRVYKAVIQLDQMHDAYEKLLKDAEKRLVKIYNSAGDYGAGDDEEGKPEKEEINEEVVGILQKAYGQGMERVDISSRGLKVLPEAFGRISGLAVLIVSNNQLTVIPDSIAGLENLEELNVATNLLDSLPDSIGLLQKLKYLNVSGNKLSALPDSICHCRSLVELDASFNGLRYLPTNIGYELKNLKKLLVHLNKLRSLPSSICEMRSLRYLDAHFNELQWLPNSIGKLTNLEVLNLSSNFSDLQELPMSFGDLINLRELNLSNNQISALPDTFGRLDNLIKLNLEQNPLQIPPKEVVRQGIQTVKTYMTNRWVEILNEQERSKVAMQEQEEIGWLTRSASLLRSFSGAITGYASGPPVSQKEAYLHEQI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2032 517 Gene3D Ribonuclease Inhibitor 389 453 IPR032675 -
Bisa08g2032 517 FunFam Plant intracellular Ras-group-related LRR protein 2 325 497 - -
Bisa08g2032 517 ProSiteProfiles Leucine-rich repeat profile. 262 283 IPR001611 GO:0005515
Bisa08g2032 517 Pfam Leucine rich repeat 262 319 IPR001611 GO:0005515
Bisa08g2032 517 Pfam Leucine rich repeat 377 437 IPR001611 GO:0005515
Bisa08g2032 517 SMART LRR_bac_2 376 397 - -
Bisa08g2032 517 SMART LRR_bac_2 353 372 - -
Bisa08g2032 517 SMART LRR_bac_2 401 420 - -
Bisa08g2032 517 SMART LRR_bac_2 283 302 - -
Bisa08g2032 517 SMART LRR_bac_2 237 256 - -
Bisa08g2032 517 SMART LRR_bac_2 306 325 - -
Bisa08g2032 517 SMART LRR_bac_2 260 279 - -
Bisa08g2032 517 SMART LRR_bac_2 330 349 - -
Bisa08g2032 517 PANTHER LEUCINE-RICH REPEAT-CONTAINING 271 447 - -
Bisa08g2032 517 SUPERFAMILY L domain-like 218 438 - -
Bisa08g2032 517 Coils Coil 127 147 - -
Bisa08g2032 517 Coils Coil 155 175 - -
Bisa08g2032 517 MobiDBLite consensus disorder prediction 43 62 - -
Bisa08g2032 517 SMART LRR_typ_2 283 306 IPR003591 -
Bisa08g2032 517 SMART LRR_typ_2 330 353 IPR003591 -
Bisa08g2032 517 SMART LRR_typ_2 260 282 IPR003591 -
Bisa08g2032 517 SMART LRR_typ_2 307 329 IPR003591 -
Bisa08g2032 517 SMART LRR_typ_2 376 400 IPR003591 -
Bisa08g2032 517 SMART LRR_typ_2 237 259 IPR003591 -
Bisa08g2032 517 SMART LRR_typ_2 401 423 IPR003591 -
Bisa08g2032 517 SMART LRR_typ_2 424 447 IPR003591 -
Bisa08g2032 517 Gene3D Ribonuclease Inhibitor 152 388 IPR032675 -
Bisa08g2032 517 ProSiteProfiles Leucine-rich repeat profile. 285 306 IPR001611 GO:0005515
Bisa08g2032 517 MobiDBLite consensus disorder prediction 19 62 - -
Bisa08g2032 517 ProSiteProfiles Leucine-rich repeat profile. 403 424 IPR001611 GO:0005515
Bisa08g2032 517 FunFam Plant intracellular Ras-group-related LRR protein 9 137 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2032 Bisa-ChrBisa08 48767645 48771396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2032 217 414 Miscellaneous Gene Families AT4G39270 35.096 5.59e-15 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2032 08 48767645 48771396 Bisa02g1245 02 20813569 20819332 CCT
Bisa08g2032 08 48767645 48771396 Bisa08g2032 08 48767645 48771396 ECH