Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1245 ATGGATCCAAACCCGGGAAGCTTCCCTATTCTCTCCTTCGTCATGAGTCGACTCCCTTCTCTGGGGCCTAGACCTTCCGCCACCGCTGAATTTGACATCGAGCAACCTCCCACTGCGGCTCCGCCTCCCCATGCTTCTTCTGGTCAACCCGAAATAGTGGACCGAATGCCTCACCTCACTGACCCGGAACTCTTGGCCGCCATGACCCGCGCCATCTCCGATGTTGCCCAGACCCGATCCGTGCTGAAGCTCCTCGGCGAGCGACCCGACCACGAAGCCATAGATGAGGCTAGGGCCAAGCTTGCGGATGTAGAAGCCCAATTGTCCAAGCAATTGGAAGAGATTGTGCTCTCGCCGAGGCCCGAGAATATCGATATCCTTCAGTGGCGAGCTCATCAGGCAGAAAGGGAGACGGAGTGCAGGGAATTAGCGGAGAAAGAGAAGCGGCGATACAAGTCAATGATACAGTTGGATGAGATGCACGATGCTTATGAGAAGCTGCTGAAGGATGCTGAGAAGATTCTGGTGGAAATTTACGAGTCTGCTGGGAAGGGAGGAGAACATGCCGAGGGAAACAAGCCTGTCCGGGAGGAGGTCAATGAAGAGGTCGTAGGGATACTACAGGAGGCATATGGAAAAGGGATGGAGCGAGTGGTTCTGTCAGGGCGGCGGTTGAGGTTGCTACCTGAGGCCTTTGGGCGAATTCCTGGCTTGGTCGTGCTTGATCTGTCGAACAATCAACTGGAGGCGATTCCTGACTCAATAGCTGGATTGCAAAGTCTTGAGGAGCTTAATGTCTCTTCAAATCTTTTGGAGTCACTTCCAGATTCAATTGGCTTGTTACAAAAATTAAAATTGCTTAATGTATCTTCAAACAAGCTGAGTGCCCTTCCTGATTCCATCTGTCACTGCAGGTCATTGGTGGAGCTGGATGCAAGCTTCAACAGTCTGACATATTTGCCAACAAACATTGGACATGAACTAGTAAATTTACAGAAGCTGTCCATTCAATTAAACAAGATTCGGTCTCTTCCCTCATCTGTTTGTGAAATGAGGTCTTTGCGGTATCTTGATGCTCATTTCAATGAGCTTCATGGGCTTCCTTTTGCAATTGGGAAATTGACTAATCTTGAAGTTCTCAACCTGAGCAGTAATTTCACTGACCTTAGAGAACTTCCTGAGACATTTGGTGATCTGACTAACCTAAGGGAGTTGGATCTCAGCAACAATCAGATCCATGCACTTCCTGATACATTTGGTCGCCTTGACAATTTGGTCAAGCTGAACTTGGAACAGAACCCTCTGGAACTGCCGCCAATGGAACTTGTAAATGAAGGGGTTGAAGCTGTAAAGACTTTTATGGCTAAGAGGTGGTTTGATCTATTGATTGAGGAAGAAAGGAAAAACATGCTTGAAATGCAAGAACAAGCACAGGCCGGCTGGTTAACTCGTAGCACCTCCTGGTTGAAGAATTACGTATATGATGTTTCTGGACATGTGGCTGAGTTTGTGGGATCTGCTGTAGGAGCTCCTAAAACGCCCACAGATCCTTATCTGAATCAGCAGCTTTGA 1572 0.4835 MDPNPGSFPILSFVMSRLPSLGPRPSATAEFDIEQPPTAAPPPHASSGQPEIVDRMPHLTDPELLAAMTRAISDVAQTRSVLKLLGERPDHEAIDEARAKLADVEAQLSKQLEEIVLSPRPENIDILQWRAHQAERETECRELAEKEKRRYKSMIQLDEMHDAYEKLLKDAEKILVEIYESAGKGGEHAEGNKPVREEVNEEVVGILQEAYGKGMERVVLSGRRLRLLPEAFGRIPGLVVLDLSNNQLEAIPDSIAGLQSLEELNVSSNLLESLPDSIGLLQKLKLLNVSSNKLSALPDSICHCRSLVELDASFNSLTYLPTNIGHELVNLQKLSIQLNKIRSLPSSVCEMRSLRYLDAHFNELHGLPFAIGKLTNLEVLNLSSNFTDLRELPETFGDLTNLRELDLSNNQIHALPDTFGRLDNLVKLNLEQNPLELPPMELVNEGVEAVKTFMAKRWFDLLIEEERKNMLEMQEQAQAGWLTRSTSWLKNYVYDVSGHVAEFVGSAVGAPKTPTDPYLNQQL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1245 523 Gene3D Ribonuclease Inhibitor 339 455 IPR032675 -
Bisa02g1245 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING 287 443 - -
Bisa02g1245 523 SMART LRR_bac_2 235 254 - -
Bisa02g1245 523 SMART LRR_bac_2 304 323 - -
Bisa02g1245 523 SMART LRR_bac_2 328 347 - -
Bisa02g1245 523 SMART LRR_bac_2 258 277 - -
Bisa02g1245 523 SMART LRR_bac_2 281 300 - -
Bisa02g1245 523 SMART LRR_bac_2 374 395 - -
Bisa02g1245 523 SMART LRR_bac_2 399 418 - -
Bisa02g1245 523 PRINTS Leucine-rich repeat signature 238 251 - -
Bisa02g1245 523 PRINTS Leucine-rich repeat signature 399 412 - -
Bisa02g1245 523 MobiDBLite consensus disorder prediction 22 53 - -
Bisa02g1245 523 ProSiteProfiles Leucine-rich repeat profile. 260 281 IPR001611 GO:0005515
Bisa02g1245 523 ProSiteProfiles Leucine-rich repeat profile. 237 259 IPR001611 GO:0005515
Bisa02g1245 523 ProSiteProfiles Leucine-rich repeat profile. 401 422 IPR001611 GO:0005515
Bisa02g1245 523 FunFam Plant intracellular Ras-group-related LRR protein 9 136 319 - -
Bisa02g1245 523 FunFam Plant intracellular Ras-group-related LRR protein 2 323 496 - -
Bisa02g1245 523 Gene3D Ribonuclease Inhibitor 154 337 IPR032675 -
Bisa02g1245 523 SMART LRR_typ_2 281 304 IPR003591 -
Bisa02g1245 523 SMART LRR_typ_2 328 351 IPR003591 -
Bisa02g1245 523 SMART LRR_typ_2 374 398 IPR003591 -
Bisa02g1245 523 SMART LRR_typ_2 399 422 IPR003591 -
Bisa02g1245 523 SMART LRR_typ_2 235 257 IPR003591 -
Bisa02g1245 523 SMART LRR_typ_2 258 280 IPR003591 -
Bisa02g1245 523 SMART LRR_typ_2 305 327 IPR003591 -
Bisa02g1245 523 Coils Coil 94 114 - -
Bisa02g1245 523 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Bisa02g1245 523 Pfam Leucine rich repeat 227 271 IPR001611 GO:0005515
Bisa02g1245 523 Coils Coil 154 174 - -
Bisa02g1245 523 SUPERFAMILY L domain-like 213 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1245 Bisa-ChrBisa02 20813569 20819332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1245 218 438 Receptor kinase-like Gene Family AT5G56040 35.065 3.32e-17 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2032 08 48767645 48771396 Bisa02g1245 02 20813569 20819332 CCT
Bisa02g1245 02 20813569 20819332 Bisa02g1245 02 20813569 20819332 ECH