Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2007 ATGCTCATTCTTTGTGCTCCAAAAGGTAAGAGTGTGAAAGTGGGAAAACCCATGAAGGCAACACTAAGGTACTTAGCAGGAATTGCAGGGCCTAGTGGCTTTGGCTCTAATTCGACAGCTGAGCATGTCACTCAACATTCCTGTTCCTTTCTTCCTTCCCATCTTACTGCTCTCATCACTGGTGGGACATCTGGGATTGGAGCTGAAACAGCGAGAGTATTAGCAAAGAGAGGAGTGAGAATAGTGATTGGAGCGAGGGACATGAAGAAAGCTCGAGAAGTGAGACACAATATTCAGAGGGAGACTCCAAATGCAGAGATTATATTGTTGGAGATTGATCTTAGCTCTTTTGCTTCTGTCCAGAGATTTTGTTCTGAGTTTTTGGCTCTTGATCTACCCCTTAATATCCTCATAAACAATGCAGGAATATTCTCTCAGAACTTGGAGTTTTCAGAAGAGAAAATTGAGATGACATTTGCTACCAATTACTTGGGGCATTTTCTGTTGACAGAAATGCTTTTGGAAAAGATGATCGAAACGGCAGAGAAAACAGGCGTTGCAGGAAGAATAATAAACGTGTCTTCTGTGATTCATAGCTGGGTCAAAAGAGATGCTTTCCGATTCCACGACATGCTCAACGGAACAAATTATAATGGTACGCGAGCATATTCTCAATCAAAATTGGCCAATATTTTGCATGCGAAGGAGTTGGCCAGACAGCTAAAGGAAAGGAATGCAAGAGTAACCATCAATGCAGTTCATCCAGGCATTGTGAAGACTGGAATTATCAGAGCTCATAAAGGCTTAATAACAGATTCCCTATTTTTCATTGCATCCAAGTTACTCAAATCAACATCTCAGGGTGCATCAACAACGTGTTATGTAGCTGTGAGTCCACAAACAGAAGGGTTGAGTGGGAAATACTTTGAAGATTGTAATGAGAGCAATTGCTCGAGTCTTGCAAATGATGAATTTGAAGCACAGAAGCTATGGAACAACACTCGTGCCTTGCTTCAAACACGACTGCGTCAAGCAGCAATTTAG 1044 0.4186 MLILCAPKGKSVKVGKPMKATLRYLAGIAGPSGFGSNSTAEHVTQHSCSFLPSHLTALITGGTSGIGAETARVLAKRGVRIVIGARDMKKAREVRHNIQRETPNAEIILLEIDLSSFASVQRFCSEFLALDLPLNILINNAGIFSQNLEFSEEKIEMTFATNYLGHFLLTEMLLEKMIETAEKTGVAGRIINVSSVIHSWVKRDAFRFHDMLNGTNYNGTRAYSQSKLANILHAKELARQLKERNARVTINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSTSQGASTTCYVAVSPQTEGLSGKYFEDCNESNCSSLANDEFEAQKLWNNTRALLQTRLRQAAI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2007 347 Gene3D - 53 343 - -
Bisa08g2007 347 PRINTS Glucose/ribitol dehydrogenase family signature 132 143 IPR002347 -
Bisa08g2007 347 PRINTS Glucose/ribitol dehydrogenase family signature 182 198 IPR002347 -
Bisa08g2007 347 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Bisa08g2007 347 PRINTS Glucose/ribitol dehydrogenase family signature 246 263 IPR002347 -
Bisa08g2007 347 PRINTS Glucose/ribitol dehydrogenase family signature 56 73 IPR002347 -
Bisa08g2007 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 56 315 IPR036291 -
Bisa08g2007 347 CDD retinol-DH_like_SDR_c_like 56 331 - -
Bisa08g2007 347 PANTHER RETINOL DEHYDROGENASE 31 337 - -
Bisa08g2007 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 196 IPR002347 -
Bisa08g2007 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Bisa08g2007 347 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 143 IPR002347 -
Bisa08g2007 347 Pfam short chain dehydrogenase 56 197 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2007 Bisa-ChrBisa08 48211154 48215104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2007 56 265 Acyl Lipid Metabolism Gene Families AT1G63380 29.767 1.96e-13 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2007 08 48211154 48215104 Bisa02g1267 02 21548594 21554892 CCT
Bisa08g2007 08 48211154 48215104 Bisa08g2007 08 48211154 48215104 ECH